ggKbase home page

scnpilot_p_inoc_scaffold_2884_curated

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2884_curated_1
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..405
DNA (405bp) protein (135aa)
Peptide ABC transporter permease {ECO:0000313|EMBL:EXU78727.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
binding-protein-dependent transport system inner membrane protein id=12550581 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
binding-protein-dependent transport system inner membrane protein
scnpilot_p_inoc_scaffold_2884_curated_2
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

402..2033
DNA (1632bp) protein (544aa)
ABC transporter related protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4A6_ACIDE
glutathione import ATP-binding protein gsiA-like
ABC transporter related protein {ECO:0000313|EMBL:EER60709.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
scnpilot_p_inoc_scaffold_2884_curated_3
Pseudomonas sp. M1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2666..2887)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1I2H6_PSEUO
Uncharacterized protein {ECO:0000313|EMBL:ETM65315.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1).;"
hypothetical protein
scnpilot_p_inoc_scaffold_2884_curated_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2884..4032)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa (strain PA7) RepID=A6V6Q0_PSEA7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR82454.1}; TaxID=381754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain PA7).;"
scnpilot_p_inoc_scaffold_2884_curated_5
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4036..6378)
DNA (2343bp) protein (781aa)
TonB-denpendent receptor n=1 Tax=Comamonas sp. B-9 RepID=UPI000395D26F
TonB-denpendent receptor {ECO:0000313|EMBL:EXU81139.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein
scnpilot_p_inoc_scaffold_2884_curated_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6514..6927)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Alcanivorax sp. PN-3 RepID=U7HP76_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_2884_curated_7
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6924..7514)
DNA (591bp) protein (197aa)
Uncharacterized protein n=2 Tax=Rhodanobacter denitrificans RepID=I4WUP0_9GAMM
Predicted nucleotidyltransferase {ECO:0000313|EMBL:BAO82777.1}; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium B1.;"
putative nucleotidyltransferase
scnpilot_p_inoc_scaffold_2884_curated_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7645..8937)
DNA (1293bp) protein (431aa)
Anti-FecI sigma factor, FecR n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UV22_VARPE
anti-FecI sigma factor FecR
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ADU37534.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
scnpilot_p_inoc_scaffold_2884_curated_9
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8956..10353)
DNA (1398bp) protein (466aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
fumarate hydratase, class ii; K01679 fumarate hydratase, class II [EC:4.2.1.2]
Fumarate hydratase class II n=2 Tax=Alicycliphilus denitrificans RepID=E8U299_ALIDB
scnpilot_p_inoc_scaffold_2884_curated_10
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10571..11077
DNA (507bp) protein (169aa)
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha (EC:4.2.1.2); K01676 fumarate hydratase, class I [EC:4.2.1.2]
fumarate hydratase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000363004F
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha {ECO:0000313|EMBL:GAD21091.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
Displaying 10 items

View Taxonomy