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scnpilot_p_inoc_scaffold_2816_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2816_curated_1
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..91
DNA (90bp) protein (30aa)
HsdR family type I site-specific deoxyribonuclease n=1 Tax=Acidovorax sp. NO-1 RepID=H0BSL5_9BURK
HsdR family type I site-specific deoxyribonuclease {ECO:0000313|EMBL:EHL24677.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
scnpilot_p_inoc_scaffold_2816_curated_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(304..651)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TU69_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV00474.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_p_inoc_scaffold_2816_curated_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(777..2186)
DNA (1410bp) protein (470aa)
heavy metal sensor kinase; K07644 two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Heavy metal sensor kinase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TU68_ALIDB
scnpilot_p_inoc_scaffold_2816_curated_4
Xanthomonas euvesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2187..2870)
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Xanthomonas euvesicatoria RepID=Q7X4F8_XANEU
Putative uncharacterized protein {ECO:0000313|EMBL:AAP42072.1}; TaxID=456327 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas euvesicatoria.;"
two component heavy metal response transcriptional regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
scnpilot_p_inoc_scaffold_2816_curated_5
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3028..3363
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MBG1_ACIET
Uncharacterized protein {ECO:0000313|EMBL:GAO21806.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2816_curated_6
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3360..4790
DNA (1431bp) protein (477aa)
Putative copper resistance-related lipoprotein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W992_ACISJ
putative copper resistance-like lipoprotein
Outer membrane efflux protein {ECO:0000313|EMBL:GAO24060.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_2816_curated_7
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4807..6219
DNA (1413bp) protein (471aa)
Multicopper oxidase type 3 n=1 Tax=Acidovorax sp. NO-1 RepID=H0BVE2_9BURK
multicopper oxidase type 3
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_2816_curated_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6253..6744
DNA (492bp) protein (164aa)
Blue (Type 1) copper domain protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W990_ACISJ
blue (type1) copper domain-containing protein
Blue copper domain-containing protein {ECO:0000313|EMBL:GAO24058.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_2816_curated_9
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6950..7291
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1R3_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER61631.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2816_curated_10
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7382..7855
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W5Z7_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO24113.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_2816_curated_11
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8153..8821
DNA (669bp) protein (223aa)
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W5Z9_ACISJ
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:GAO24111.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
isoprenylcysteine carboxyl methyltransferase
scnpilot_p_inoc_scaffold_2816_curated_12
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8873..9166
DNA (294bp) protein (98aa)
Heavy metal transport/detoxification protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W600_ACISJ
heavy metal transport/detoxification protein
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:ABM41675.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_p_inoc_scaffold_2816_curated_13
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9251..9502
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GGE6_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB85100.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_p_inoc_scaffold_2816_curated_14
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9506..11320
DNA (1815bp) protein (605aa)
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:AEB85099.1}; EC=3.6.3.4 {ECO:0000313|EMBL:AEB85099.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
heavy metal translocating P-type ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Heavy metal translocating P-type ATPase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GGE5_ALIDK
Displaying 14 items

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