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scnpilot_p_inoc_scaffold_2457_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2457_curated_1
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..463
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q8Y7_ACIAP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADX45918.1}; Flags: Precursor;; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scnpilot_p_inoc_scaffold_2457_curated_2
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(473..1270)
DNA (798bp) protein (266aa)
Protein phosphatase 2C domain protein n=2 Tax=Acidovorax RepID=A1W6Y9_ACISJ
protein serine/threonine phosphatase
Protein phosphatase 2C domain protein {ECO:0000313|EMBL:ABM42014.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_p_inoc_scaffold_2457_curated_3
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1382..3355
DNA (1974bp) protein (658aa)
helicase C2; K03722 ATP-dependent DNA helicase DinG [EC:3.6.4.12]
Helicase c2 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T193_ACIDE
Helicase c2 {ECO:0000313|EMBL:EER61740.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
scnpilot_p_inoc_scaffold_2457_curated_4
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3544..4050
DNA (507bp) protein (169aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BCE5_PARDP
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABL73189.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
scnpilot_p_inoc_scaffold_2457_curated_5
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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4055..5011
DNA (957bp) protein (319aa)
Sigma factor regulatory protein FecR n=1 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0CA80_ALCDB
sigma factor regulatory protein FecR
Sigma factor regulatory protein FecR {ECO:0000313|EMBL:AFT69538.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5).;"
scnpilot_p_inoc_scaffold_2457_curated_6
Methylophaga nitratireducenticrescens, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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5158..7686
DNA (2529bp) protein (843aa)
hypothetical protein n=1 Tax=Comamonas sp. B-9 RepID=UPI00039568C4
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein
Methylophaga nitratireducenticrescens strain JAM1, complete genome {ECO:0000313|EMBL:AFI83027.1}; Flags: Precursor;; TaxID=754476 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM; 25689 / JAM1).;"
scnpilot_p_inoc_scaffold_2457_curated_7
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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7799..9346
DNA (1548bp) protein (516aa)
Putative iron-regulated membrane protein n=1 Tax=Arcobacter butzleri 7h1h RepID=S5PU75_9PROT
putative iron-regulated membrane protein
Putative iron-regulated membrane protein {ECO:0000313|EMBL:AGR77295.1}; TaxID=1036172 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter butzleri 7h1h.;"
scnpilot_p_inoc_scaffold_2457_curated_8
Burkholderia rhizoxinica, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9349..9756)
DNA (408bp) protein (136aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=882378 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454).;"
Ribonuclease VapC n=1 Tax=Burkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454) RepID=E5AQF5_BURRH
VIRULENCE-ASSOCIATED PROTEIN C; K07062
scnpilot_p_inoc_scaffold_2457_curated_9
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9772..10008)
DNA (237bp) protein (79aa)
Prevent-host-death family protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ETE4_9RHIZ
Prevent-host-death family protein {ECO:0000313|EMBL:CCV07228.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
prevent-host-death family protein
scnpilot_p_inoc_scaffold_2457_curated_10
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10071..10391
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas fulva (strain 12-X) RepID=F6ABX4_PSEF1
Strain MEJ086 contig_79, whole genome shotgun sequence {ECO:0000313|EMBL:KIP93879.1}; TaxID=47880 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2457_curated_11
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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10388..11218
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Pseudomonas pelagia RepID=UPI00039C7A3E
Uncharacterized protein {ECO:0000313|EMBL:ENO90445.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2457_curated_12
unknown

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11215..11547
DNA (333bp) protein (111aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2457_curated_13
CG_Rhodof_03, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11600..12010)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI0003823FE3
PilT protein domain-containing protein; K07062
Tax=CG_Rhodof_03
scnpilot_p_inoc_scaffold_2457_curated_14
unknown

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comp(12033..12287)
DNA (255bp) protein (85aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2457_curated_15
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12469..12675)
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003642DA9
Na+/Pi-cotransporter {ECO:0000313|EMBL:GAD22509.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
Na+/Pi-cotransporter; K03324 phosphate:Na+ symporter
Displaying 15 items

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