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scnpilot_p_inoc_scaffold_4295_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_4295_curated_1
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..556)
DNA (555bp) protein (185aa)
NAD(P)H dehydrogenase (quinone); K00358 [EC:1.6.99.-]
NAD(P)H dehydrogenase (Quinone) n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WC33_ACISJ
NAD(P)H dehydrogenase (Quinone) {ECO:0000313|EMBL:ABM43808.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_p_inoc_scaffold_4295_curated_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(584..3145)
DNA (2562bp) protein (854aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3]
DNA gyrase subunit B n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003638499
scnpilot_p_inoc_scaffold_4295_curated_3
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3220..4326)
DNA (1107bp) protein (369aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7]
UPI00039CC80D related cluster n=1 Tax=unknown RepID=UPI00039CC80D
scnpilot_p_inoc_scaffold_4295_curated_4
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4396..5829)
DNA (1434bp) protein (478aa)
chromosomal replication initiation protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003720275
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
dnaA; chromosomal replication initiation protein; K02313 chromosomal replication initiator protein
scnpilot_p_inoc_scaffold_4295_curated_5
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6155..6289
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=12 Tax=Comamonadaceae RepID=RL34_ACIAC
ribosomal protein l34; K02914 large subunit ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|RuleBase:RU000566}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scnpilot_p_inoc_scaffold_4295_curated_6
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6345..6803
DNA (459bp) protein (153aa)
Ribonuclease P protein component {ECO:0000256|SAAS:SAAS00143752}; EC=3.1.26.5 {ECO:0000256|SAAS:SAAS00143815};; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein; K03536 ribonuclease P protein component [EC:3.1.26.5]
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7V5_ACIDE
scnpilot_p_inoc_scaffold_4295_curated_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6800..7090
DNA (291bp) protein (97aa)
Putative membrane protein insertion efficiency factor n=2 Tax=Delftia RepID=A9C1M2_DELAS
hypothetical protein; K08998 hypothetical protein
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
scnpilot_p_inoc_scaffold_4295_curated_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7087..8364
DNA (1278bp) protein (426aa)
Membrane protein insertase YidC n=2 Tax=Alicycliphilus denitrificans RepID=E8TZI7_ALIDB
membrane protein insertase, yidc/oxa1 family domain containing; K03217 preprotein translocase subunit YidC
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Displaying 8 items

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