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scnpilot_p_inoc_scaffold_1580_curated

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1580_curated_1
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..1861)
DNA (1860bp) protein (620aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
Histidine kinase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BNW4_DELAS
histidine kinase
scnpilot_p_inoc_scaffold_1580_curated_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1858..3399)
DNA (1542bp) protein (514aa)
Fis family transcriptional regulator n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000377D77E
Predicted ATPase with chaperone activity {ECO:0000313|EMBL:GAD20526.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
Mg chelatase subunit ChlI; K07391 magnesium chelatase family protein
scnpilot_p_inoc_scaffold_1580_curated_3
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3669..4388
DNA (720bp) protein (240aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUB3_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL24049.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1580_curated_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4402..4740
DNA (339bp) protein (113aa)
nitrogen regulatory protein P-II; K04752 nitrogen regulatory protein P-II 2 id=12550753 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
nitrogen regulatory protein P-II; K04752 nitrogen regulatory protein P-II 2
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1580_curated_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4781..6214
DNA (1434bp) protein (478aa)
ammonium transporter; K03320 ammonium transporter, Amt family id=12550754 bin=BDI species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ammonium transporter; K03320 ammonium transporter, Amt family
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1580_curated_6
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6349..7506)
DNA (1158bp) protein (386aa)
diguanylate cyclase id=12550064 bin=BDI species=Pseudomonas alcaligenes genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
diguanylate cyclase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_1580_curated_7
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7665..8750
DNA (1086bp) protein (362aa)
FAD-binding protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000369D63B
FAD/FMN-containing dehydrogenases {ECO:0000313|EMBL:GAD20501.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
fad linked oxidase domain-containing protein; K11472 glycolate oxidase FAD binding subunit
scnpilot_p_inoc_scaffold_1580_curated_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8773..9558
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HTN1_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44002.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_1580_curated_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9574..10839
DNA (1266bp) protein (422aa)
glcF; glycolate oxidase, iron-sulfur subunit GlcF id=12550757 bin=BDI species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
gclF; Glycolate oxidase iron-sulfur subunit; K11473 glycolate oxidase iron-sulfur subunit
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1580_curated_10
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10890..13382)
DNA (2493bp) protein (831aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUA6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KJA11104.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1580_curated_11
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13379..14380)
DNA (1002bp) protein (334aa)
ABC-type nitrate/sulfonate/bicarbonate transport system protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUA4_9BURK
ABC-type nitrate/sulfonate/bicarbonate transport system protein {ECO:0000313|EMBL:EHL24040.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
ABC-type nitrate/sulfonate/bicarbonate transport system protein; K02051 NitT/TauT family transport system substrate-binding protein
scnpilot_p_inoc_scaffold_1580_curated_12
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14684..15334
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000369CD7E
Uncharacterized protein {ECO:0000313|EMBL:GAD20498.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
ProQ activator of osmoprotectant transporter ProP
scnpilot_p_inoc_scaffold_1580_curated_13
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15430..15909
DNA (480bp) protein (160aa)
Transcription activator effector binding n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MAM7_ACIET
uncharacterized LOC100488972
Transcription activator effector binding {ECO:0000313|EMBL:ACM31674.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_p_inoc_scaffold_1580_curated_14
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15927..16655
DNA (729bp) protein (243aa)
Helix-turn-helix, type 11 domain protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W2F2_ACISJ
helix-turn-helix type 11 domain-containing protein
Helix-turn-helix, type 11 domain protein {ECO:0000313|EMBL:ABM40427.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_p_inoc_scaffold_1580_curated_15
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16796..17296)
DNA (501bp) protein (167aa)
Glutathione peroxidase (Fragment) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TD82_ACIDE
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; Flags: Fragment;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
peroxiredoxin
scnpilot_p_inoc_scaffold_1580_curated_16
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17342..18214)
DNA (873bp) protein (291aa)
membrane protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036BD55B
Permeases of the drug/metabolite transporter (DMT) superfamily {ECO:0000313|EMBL:GAD20495.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1580_curated_17
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18270..19571)
DNA (1302bp) protein (434aa)
Lysophospholipid transporter LplT n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYE4_9BURK
Major facilitator transporter {ECO:0000313|EMBL:KJA12094.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
lysophospholipid transporter LplT
scnpilot_p_inoc_scaffold_1580_curated_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19742..20851
DNA (1110bp) protein (370aa)
alr; alanine racemase (EC:5.1.1.1)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU000608}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU000608};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Alanine racemase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVZ9_9BURK
scnpilot_p_inoc_scaffold_1580_curated_19
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20993..22003
DNA (1011bp) protein (337aa)
cytochrome-c peroxidase (EC:1.11.1.5); K00428 cytochrome c peroxidase [EC:1.11.1.5]
Cytochrome-c peroxidase {ECO:0000313|EMBL:AEB82668.1}; EC=1.11.1.5 {ECO:0000313|EMBL:AEB82668.1};; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Cytochrome-c peroxidase n=2 Tax=Alicycliphilus denitrificans RepID=E8TTW9_ALIDB
scnpilot_p_inoc_scaffold_1580_curated_20
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22110..22418)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFH5_AZOSU
hypothetical protein
Tax=GWA2_Gallionellales_60_18_curated
Displaying 20 items

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