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scnpilot_p_inoc_scaffold_2538_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2538_curated_1
unknown

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comp(3..83)
DNA (81bp) protein (27aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2538_curated_2
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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222..1235
DNA (1014bp) protein (338aa)
P-type conjugative transfer protein TrbG n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0A1_9BURK
P-type conjugative transfer protein TrbG {ECO:0000313|EMBL:EHL22017.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
Conjugative transfer protein TrbG; K03204 type IV secretion system protein VirB9
scnpilot_p_inoc_scaffold_2538_curated_3
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1238..2503
DNA (1266bp) protein (422aa)
Conjugation trbi family protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0A2_9BURK
Conjugation trbi family protein {ECO:0000313|EMBL:EHL22018.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10
scnpilot_p_inoc_scaffold_2538_curated_4
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2500..2748
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQG8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KIL02729.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
hypothetical protein
scnpilot_p_inoc_scaffold_2538_curated_5
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3120..4223)
DNA (1104bp) protein (368aa)
NlpBDapX family lipoprotein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TLT9_ACIAC
NlpB/DapX family lipoprotein; K07287 lipoprotein-34
NlpBDapX family lipoprotein {ECO:0000313|EMBL:ABM31927.1}; Flags: Precursor;; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scnpilot_p_inoc_scaffold_2538_curated_6

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comp(4267..5163)
DNA (897bp) protein (299aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1256543 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_1134.;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=uncultured bacterium A1Q1_fos_1134 RepID=L7VYR5_9BACT
dihydrodipicolinate synthase-like
scnpilot_p_inoc_scaffold_2538_curated_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5320..5769)
DNA (450bp) protein (150aa)
rnhA; ribonuclease H (EC:3.1.26.4)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Ribonuclease H n=1 Tax=Acidovorax sp. KKS102 RepID=K0I982_9BURK
scnpilot_p_inoc_scaffold_2538_curated_8
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5772..6563)
DNA (792bp) protein (264aa)
Methyltransferase type 11 n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q0R2_ACIAP
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ADX46463.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scnpilot_p_inoc_scaffold_2538_curated_9
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6607..7338
DNA (732bp) protein (244aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hydroxyacylglutathione hydrolase (EC:3.1.2.6); K01069 hydroxyacylglutathione hydrolase [EC:3.1.2.6]
hydroxyacylglutathione hydrolase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035EC9D3
scnpilot_p_inoc_scaffold_2538_curated_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7335..8840
DNA (1506bp) protein (502aa)
Lytic transglycosylase catalytic subunit n=1 Tax=Acidovorax sp. KKS102 RepID=K0HRL2_9BURK
lytic transglycosylase catalytic subunit
Lytic transglycosylase catalytic subunit {ECO:0000313|EMBL:AFU45578.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_2538_curated_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8876..9301)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I081_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU45575.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_2538_curated_12
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9383..9973)
DNA (591bp) protein (197aa)
Recombination protein RecR n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MI38_ACIET
recR; recombination protein recr; K06187 recombination protein RecR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_p_inoc_scaffold_2538_curated_13
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9977..10309)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037C1A24
hypothetical protein; K09747 hypothetical protein
Nucleoid-associated protein DelCs14_1949 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
scnpilot_p_inoc_scaffold_2538_curated_14
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10342..12240)
DNA (1899bp) protein (633aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III subunit gamma/tau n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000360B998
DNA polymerase III, gamma/tau subunits {ECO:0000313|EMBL:GAD23980.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
Displaying 14 items

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