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scnpilot_p_inoc_scaffold_2386_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2386_curated_1
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..266
DNA (264bp) protein (88aa)
Flagellar export protein FliJ n=2 Tax=Alicycliphilus denitrificans RepID=E8TSW0_ALIDB
uncharacterized LOC100485477
Flagellar export protein FliJ {ECO:0000313|EMBL:ADV01561.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_p_inoc_scaffold_2386_curated_2
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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272..1639
DNA (1368bp) protein (456aa)
flagellar hook-length control protein n=1 Tax=Acidovorax avenae RepID=UPI0002D2B684
Flagellar hook-length control protein {ECO:0000313|EMBL:EER61491.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
flagellar hook-length control protein-like protein; K02414 flagellar hook-length control protein FliK
scnpilot_p_inoc_scaffold_2386_curated_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1768..2352
DNA (585bp) protein (195aa)
Flagellar basal body-associated protein FliL n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXR7_9BURK
flagellar basal body-associated protein FliL
Flagellar basal body-associated protein FliL {ECO:0000313|EMBL:AFU47848.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_2386_curated_4
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2377..3381
DNA (1005bp) protein (335aa)
flagellar motor switch protein FliM n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037DF676
Flagellar motor switch protein flim {ECO:0000313|EMBL:GAD23934.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
flagellar motor switch protein FliM
scnpilot_p_inoc_scaffold_2386_curated_5
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3371..3841
DNA (471bp) protein (157aa)
flagellar motor switch protein FliN n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003688AC1
Flagellar motor switch protein flin {ECO:0000313|EMBL:GAD23935.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
flagellar motor switch protein FliN; K02417 flagellar motor switch protein FliN/FliY
scnpilot_p_inoc_scaffold_2386_curated_6
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3849..4184
DNA (336bp) protein (112aa)
Flagellar biosynthesis protein, FliO n=2 Tax=Acidovorax RepID=A1WCD0_ACISJ
flagellar biosynthesis protein flio; K02418 flagellar protein FliO/FliZ
Flagellar biosynthesis protein FliO {ECO:0000313|EMBL:ACM34505.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_p_inoc_scaffold_2386_curated_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4177..4929
DNA (753bp) protein (251aa)
Flagellar biosynthetic protein FliP n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G627_ALIDK
fliP; flagellar biosynthesis protein FliP; K02419 flagellar biosynthetic protein FliP
Flagellar biosynthetic protein FliP {ECO:0000313|EMBL:AEB86508.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_p_inoc_scaffold_2386_curated_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4943..5212
DNA (270bp) protein (90aa)
flagellar biosynthesis protein FliQ n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003607367
Flagellar biosynthetic protein FliQ {ECO:0000313|EMBL:GAD23938.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
flagellar biosynthetic protein FliQ
scnpilot_p_inoc_scaffold_2386_curated_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5237..6004
DNA (768bp) protein (256aa)
Flagellar biosynthetic protein FliR n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3W9_9BURK
flagellar biosynthetic protein FliR
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_2386_curated_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6058..6687)
DNA (630bp) protein (210aa)
Response regulator receiver n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TSV1_ALIDB
response regulator gacA-like
Response regulator receiver {ECO:0000313|EMBL:ADV01552.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_p_inoc_scaffold_2386_curated_11

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comp(6684..7781)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DLJ3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD98086.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
response regulator receiver sensor signal transduction histidine kinase
scnpilot_p_inoc_scaffold_2386_curated_12
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7983..8378
DNA (396bp) protein (132aa)
hypothetical protein id=12553357 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_2386_curated_13
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8429..8791
DNA (363bp) protein (121aa)
Response regulator receiver protein n=2 Tax=Acidovorax RepID=A1TVD1_ACIAC
response regulator ArlR-like
Response regulator receiver protein {ECO:0000313|EMBL:ADX48160.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scnpilot_p_inoc_scaffold_2386_curated_14
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8833..10971
DNA (2139bp) protein (713aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
CheA signal transduction histidine kinase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TVD0_ACIAC
chemotaxis protein cheA-like
scnpilot_p_inoc_scaffold_2386_curated_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11032..11520
DNA (489bp) protein (163aa)
CheW protein id=12553354 bin=BDI species=Curvibacter lanceolatus genus=Curvibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
CheW protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_2386_curated_16
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11532..12407
DNA (876bp) protein (292aa)
Chemotaxis protein methyltransferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BWA8_9BURK
chemotaxis protein CheR
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_2386_curated_17
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12441..13193
DNA (753bp) protein (251aa)
chemoreceptor glutamine deamidase CheD; K03411 chemotaxis protein CheD [EC:3.5.1.44]
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TVC7_ACIAC
scnpilot_p_inoc_scaffold_2386_curated_18
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13222..14334
DNA (1113bp) protein (371aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Acidovorax sp. CF316 RepID=J1EL76_9BURK
chemotaxis response regulator protein-glutamate methylesterase 1-like
scnpilot_p_inoc_scaffold_2386_curated_19
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14469..16349)
DNA (1881bp) protein (627aa)
ABC transporter related n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MG97_ACIET
ABC transporter; K15738 ATP-binding cassette, subfamily F, uup
ABC transporter related {ECO:0000313|EMBL:ACM34492.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Displaying 19 items

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