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scnpilot_p_inoc_scaffold_2637_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2637_curated_1
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..318)
DNA (318bp) protein (106aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
Glutamyl-tRNA reductase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=HEM1_ACIAC
peptide chain release factor 1-like
scnpilot_p_inoc_scaffold_2637_curated_2
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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366..677
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T2D8_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER61328.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2637_curated_3
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(690..1445)
DNA (756bp) protein (252aa)
glycerophosphodiester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
Glycerophosphodiester phosphodiesterase (Glycerophosphoryl diester phosphodiesterase)-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XXA6_RAMTT
Glycerophosphodiester phosphodiesterase (Glycerophosphoryl diester phosphodiesterase)-like protein {ECO:0000313|EMBL:AEG94241.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
scnpilot_p_inoc_scaffold_2637_curated_4
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1442..2464)
DNA (1023bp) protein (341aa)
ABC transporter; K05816 sn-glycerol 3-phosphate transport system ATP-binding protein [EC:3.6.3.20]
ABC transporter related protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U0V9_ALIDB
Glycerol-3-phosphate-transporting ATPase {ECO:0000313|EMBL:GAO26796.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_2637_curated_5
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2528..3379)
DNA (852bp) protein (284aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6W1_ACIDE
binding-protein-dependent transport systems inner membrane component; K05815 sn-glycerol 3-phosphate transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EER59792.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
scnpilot_p_inoc_scaffold_2637_curated_6
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3464..4345)
DNA (882bp) protein (294aa)
glycerol-3-phosphate transporter permease n=1 Tax=Comamonas sp. B-9 RepID=UPI0003958532
sn-glycerol-3-phosphate transport system permease protein ugpA-like
Glycerol-3-phosphate transporter permease {ECO:0000313|EMBL:AIJ45017.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
scnpilot_p_inoc_scaffold_2637_curated_7
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4415..5731)
DNA (1317bp) protein (439aa)
Extracellular solute-binding protein family 1 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6V9_ACIDE
sn-glycerol-3-phosphate-binding periplasmic protein ugpB-like
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EER59790.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
scnpilot_p_inoc_scaffold_2637_curated_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5977..7209
DNA (1233bp) protein (411aa)
3-phosphoglycerate dehydrogenase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036D0A28
d-3-phosphoglycerate dehydrogenase-like
Phosphoglycerate dehydrogenase and related dehydrogenases {ECO:0000313|EMBL:GAD23256.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_p_inoc_scaffold_2637_curated_9
unknown

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7230..7319
DNA (90bp) protein (30aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2637_curated_10
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7333..9204
DNA (1872bp) protein (624aa)
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Limnobacter sp. MED105 RepID=A6GRE2_9BURK
Periplasmic sensor signal transduction histidine kinase {ECO:0000313|EMBL:EDM83193.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. MED105.;"
integral membrane sensor signal transduction histidine kinase
scnpilot_p_inoc_scaffold_2637_curated_11
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9189..9887
DNA (699bp) protein (233aa)
Two component transcriptional regulator, winged helix family protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GRE3_9BURK
Two component transcriptional regulator, winged helix family protein {ECO:0000313|EMBL:EDM83194.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. MED105.;"
response regulator in two-component regulatory system
scnpilot_p_inoc_scaffold_2637_curated_12
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10082..11932
DNA (1851bp) protein (617aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036BA0A5
Uncharacterized protein {ECO:0000313|EMBL:GAD22720.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
S-layer domain-containing protein
Displaying 12 items

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