ggKbase home page

scnpilot_p_inoc_scaffold_1860_curated

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1860_curated_1
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..262
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KPH9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJE53078.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1860_curated_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

353..1390
DNA (1038bp) protein (346aa)
vitamin-B12 independent methionine synthase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Chryseobacterium taeanense RepID=UPI00030F88B7
5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase {ECO:0000313|EMBL:EPD42741.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_p_inoc_scaffold_1860_curated_3
Alcanivorax sp. 19-m-6, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1989..2660)
DNA (672bp) protein (224aa)
Cytochrome C n=1 Tax=Alcanivorax sp. P2S70 RepID=U7FSN7_9GAMM
Cytochrome c5 {ECO:0000313|EMBL:KGD64900.1}; TaxID=1177154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp. 19-m-6.;"
cytochrome c, class I
scnpilot_p_inoc_scaffold_1860_curated_4
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2677..3900)
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037D9B5E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB64914.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
scnpilot_p_inoc_scaffold_1860_curated_5
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3905..5311)
DNA (1407bp) protein (469aa)
cytochrome C n=1 Tax=Methyloferula stellata RepID=UPI0003678465
cytochrome c
Putative Cytochrome c {ECO:0000313|EMBL:CCB64913.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
scnpilot_p_inoc_scaffold_1860_curated_6
unknown

Not on your lists

comp(5339..5524)
DNA (186bp) protein (62aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1860_curated_7
unknown

Not on your lists

comp(5521..5727)
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1860_curated_8
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5831..6223)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DJR0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU84563.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
lipoprotein
scnpilot_p_inoc_scaffold_1860_curated_9
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6225..6737)
DNA (513bp) protein (171aa)
MarR family transcriptional regulator n=1 Tax=Acidovorax avenae RepID=UPI0002F75B53
Uncharacterized protein {ECO:0000313|EMBL:EKU84564.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
MarR family transcriptional regulator
scnpilot_p_inoc_scaffold_1860_curated_10
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6982..7368
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DJR0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU84563.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
lipoprotein
scnpilot_p_inoc_scaffold_1860_curated_11
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8022..9206
DNA (1185bp) protein (395aa)
Thiol reductant ABC exporter, CydD subunit n=1 Tax=Massilia timonae CCUG 45783 RepID=K9E0Y7_9BURK
Thiol reductant ABC exporter, CydD subunit {ECO:0000313|EMBL:EKU84562.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
cysteine ABC transporter permease/ATP-binding protein CydD; K16013 ATP-binding cassette, subfamily C, bacterial CydD
scnpilot_p_inoc_scaffold_1860_curated_12
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9203..10924
DNA (1722bp) protein (574aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DMW7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU84561.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
putative thiol reductant ABC exporter, CydC subunit
scnpilot_p_inoc_scaffold_1860_curated_13
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10961..12586
DNA (1626bp) protein (542aa)
cytochrome bd ubiquinol oxidase subunit I; K00425 cytochrome d ubiquinol oxidase subunit I [EC:1.10.3.-]
cytochrome BD oxidase subunit I n=1 Tax=Acidovorax avenae RepID=UPI0002EF4D09
Cytochrome bd-type quinol oxidase, subunit 1 {ECO:0000313|EMBL:GAD24490.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_p_inoc_scaffold_1860_curated_14
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12583..13737
DNA (1155bp) protein (385aa)
cytochrome BD oxidase subunit II n=1 Tax=Acidovorax avenae RepID=UPI0002D44E8F
Cytochrome D ubiquinol oxidase subunit II {ECO:0000313|EMBL:EKF42541.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
cytochrome d ubiquinol oxidase, subunit II
scnpilot_p_inoc_scaffold_1860_curated_15
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13763..13918
DNA (156bp) protein (52aa)
Cyd operon protein YbgT n=1 Tax=Variovorax sp. CF313 RepID=J2L2Y9_9BURK
outer membrane lipoprotein
Variovorax paradoxus strain MEDvA23 contig_132, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16740.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
scnpilot_p_inoc_scaffold_1860_curated_16
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14820..15188
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WX50_DELAC
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
scnpilot_p_inoc_scaffold_1860_curated_17
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15439..17607
DNA (2169bp) protein (723aa)
Ferrichrome-iron receptor n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AD04_COLFT
Ferrichrome-iron receptor {ECO:0000313|EMBL:AEK63109.1}; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
ferrichrome-iron receptor; K02014 iron complex outermembrane recepter protein
scnpilot_p_inoc_scaffold_1860_curated_18
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17624..17872
DNA (249bp) protein (83aa)
Twin-arginine translocation pathway signal n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IX01_RHOP2
twin-arginine translocation pathway signal
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:ABD07259.1}; Flags: Precursor;; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
Displaying 18 items

View Taxonomy