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scnpilot_p_inoc_scaffold_1194_curated

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1194_curated_1
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..2492
DNA (2490bp) protein (830aa)
glycine dehydrogenase; K00281 glycine dehydrogenase [EC:1.4.4.2]
glycine dehydrogenase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003635D79
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1194_curated_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2565..3596)
DNA (1032bp) protein (344aa)
Integron integrase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GE58_ALIDK
integron integrase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1194_curated_3
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4798..5088
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0K8_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL21839.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1194_curated_4
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5294..6175
DNA (882bp) protein (294aa)
Terminase n=1 Tax=Porphyromonas gingivalis (strain TDC60) RepID=F5XBI3_PORGT
Terminase {ECO:0000313|EMBL:CDV96338.1}; TaxID=49338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (Desulfitobacterium frappieri).;"
terminase
scnpilot_p_inoc_scaffold_1194_curated_5
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8050..8820
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0C1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KJA08784.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1194_curated_6
unknown

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9376..9855
DNA (480bp) protein (160aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1194_curated_7
unknown

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9997..10209
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1194_curated_8
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10310..10723
DNA (414bp) protein (138aa)
FKBP-type peptidylprolyl isomerase; K03772 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W790_ACISJ
scnpilot_p_inoc_scaffold_1194_curated_9
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10731..11792
DNA (1062bp) protein (354aa)
Transcriptional regulator, MerR family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T338_ACIDE
MerR family transcriptional regulator {ECO:0000313|EMBL:KJA09089.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
antibiotic resistance transcriptional regulator, MerR family
scnpilot_p_inoc_scaffold_1194_curated_10
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11829..13037
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003825C8C
Uncharacterized protein {ECO:0000313|EMBL:GAD21298.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
acyltransferase 3
scnpilot_p_inoc_scaffold_1194_curated_11
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13027..14340
DNA (1314bp) protein (438aa)
Major facilitator superfamily MFS_1 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T340_ACIDE
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EER61127.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1194_curated_12
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14444..17644)
DNA (3201bp) protein (1067aa)
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
DNA polymerase III subunit alpha (EC:2.7.7.7); K14162 error-prone DNA polymerase [EC:2.7.7.7]
DNA polymerase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036B882B
scnpilot_p_inoc_scaffold_1194_curated_13
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17641..18981)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W7C1_ACISJ
hypothetical protein; K14161 protein ImuB
Uncharacterized protein {ECO:0000313|EMBL:ABM42146.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_p_inoc_scaffold_1194_curated_14
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18950..19702)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003642D9C
Uncharacterized protein {ECO:0000313|EMBL:GAD24993.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein; K14160 protein ImuA
scnpilot_p_inoc_scaffold_1194_curated_15
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19789..21627)
DNA (1839bp) protein (613aa)
gamma-glutamyltransferase n=1 Tax=Acidovorax avenae RepID=UPI0002E1EFCA
putative gamma-glutamyltransferase
Putative gamma-glutamyltransferase {ECO:0000313|EMBL:AGU50745.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
scnpilot_p_inoc_scaffold_1194_curated_16
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21624..23153)
DNA (1530bp) protein (510aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Herbaspirillum sp. YR522 RepID=J3CIM5_9BURK
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:EJN06629.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;"
putative acetyl-CoA synthetase
scnpilot_p_inoc_scaffold_1194_curated_17
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23150..23941)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Herbaspirillum lusitanum RepID=UPI0002DF95CC
Uncharacterized protein {ECO:0000313|EMBL:EOA02877.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense GSF30.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1194_curated_18
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23946..24383)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Herbaspirillum sp. YR522 RepID=J3HUY3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJN06631.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;"
thioesterase superfamily protein
scnpilot_p_inoc_scaffold_1194_curated_19
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24406..25431)
DNA (1026bp) protein (342aa)
Zn-dependent oxidoreductase, NADPH:quinone reductase n=1 Tax=Herbaspirillum sp. YR522 RepID=J2VKP4_9BURK
Zn-dependent oxidoreductase, NADPH:quinone reductase {ECO:0000313|EMBL:EJN06632.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;"
alcohol dehydrogenase
scnpilot_p_inoc_scaffold_1194_curated_20
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25574..26557)
DNA (984bp) protein (328aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component n=1 Tax=Herbaspirillum sp. YR522 RepID=J3HVA0_9BURK
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:EJN06633.1}; Flags: Precursor;; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;"
nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein; K02051 NitT/TauT family transport system substrate-binding protein
scnpilot_p_inoc_scaffold_1194_curated_21
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26563..27408)
DNA (846bp) protein (282aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Herbaspirillum sp. YR522 RepID=J3CIM8_9BURK
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:EJN06634.1}; Flags: Precursor;; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;"
nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein; K02050 NitT/TauT family transport system permease protein
scnpilot_p_inoc_scaffold_1194_curated_22
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27405..28178)
DNA (774bp) protein (258aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component n=1 Tax=Herbaspirillum sp. YR522 RepID=J2W285_9BURK
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component {ECO:0000313|EMBL:EJN06635.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;"
ABC transporter; K02049 NitT/TauT family transport system ATP-binding protein
scnpilot_p_inoc_scaffold_1194_curated_23
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28175..28924)
DNA (750bp) protein (250aa)
Transcriptional regulator n=1 Tax=Herbaspirillum sp. YR522 RepID=J3HUY5_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EJN06636.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;"
GntR family transcriptional regulator
Displaying 23 items

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