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scnpilot_p_inoc_scaffold_900_curated

Search features with annotation key words

Displaying items 31-60 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_900_curated_31
Pseudomonas sp. StFLB209, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31659..32297)
DNA (639bp) protein (213aa)
Plasmid partitioning protein n=1 Tax=Pseudomonas aeruginosa BWHPSA022 RepID=U8RDS6_PSEAI
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:BAP44820.1}; TaxID=1028989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. StFLB209.;"
parA; ATPase involved in plasmid partitioning; K03496 chromosome partitioning protein
scnpilot_p_inoc_scaffold_900_curated_32
Cupriavidus oxalaticus, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32587..33432)
DNA (846bp) protein (282aa)
RepA replication protein n=1 Tax=Comamonas testosteroni RepID=UPI0002F43E56
Putative replication initiation protein {ECO:0000313|EMBL:CAD61130.1}; TaxID=96344 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus oxalaticus.;"
putative replication initiator and transcription repressor protein
scnpilot_p_inoc_scaffold_900_curated_33
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33459..33749)
DNA (291bp) protein (97aa)
hypothetical protein id=12552214 bin=BDI species=Stenotrophomonas maltophilia genus=Stenotrophomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAQ44864.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
scnpilot_p_inoc_scaffold_900_curated_34
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33833..34606)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FTG8_STRMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAQ44865.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
scnpilot_p_inoc_scaffold_900_curated_35
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34948..35310)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FTG9_STRMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAQ44866.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
scnpilot_p_inoc_scaffold_900_curated_36
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35519..35812
DNA (294bp) protein (98aa)
Helix-turn-helix domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9P1_ALIDK
XRE family transcriptional regulator {ECO:0000313|EMBL:AIJ46923.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
helix-turn-helix domain-containing protein
scnpilot_p_inoc_scaffold_900_curated_37
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35933..36832
DNA (900bp) protein (300aa)
Putative pANL2 n=1 Tax=Vibrio cholerae 623-39 RepID=A6AAR4_VIBCL
Uncharacterized protein {ECO:0000313|EMBL:AIJ46922.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
hypothetical protein
scnpilot_p_inoc_scaffold_900_curated_38
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37204..37518)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Ralstonia solanacearum RepID=UPI0001817214
Uncharacterized protein {ECO:0000313|EMBL:GAO20600.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_900_curated_39
Pseudomonas sp. SHC52, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38364..38735
DNA (372bp) protein (124aa)
glutathione-dependent formaldehyde-activating protein (EC:2.7.9.2)
Glutathione-dependent formaldehyde-activating, GFA n=1 Tax=Puniceispirillum marinum (strain IMCC1322) RepID=D5BRU5_PUNMI
Gfa-like protein {ECO:0000313|EMBL:CDF96582.1}; TaxID=984195 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. SHC52.;"
scnpilot_p_inoc_scaffold_900_curated_40
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38888..39094)
DNA (207bp) protein (69aa)
UPI0003D680CD related cluster n=1 Tax=unknown RepID=UPI0003D680CD
Uncharacterized protein {ECO:0000313|EMBL:KIL06295.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
hypothetical protein
scnpilot_p_inoc_scaffold_900_curated_41
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39158..41224)
DNA (2067bp) protein (689aa)
plasmid stablization protein ParB n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003488E42
Nuclease {ECO:0000313|EMBL:GAO24341.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
nuclease
scnpilot_p_inoc_scaffold_900_curated_42
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41295..42122)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XAB6_DELAC
Uncharacterized protein {ECO:0000313|EMBL:AIJ46913.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
hypothetical protein
scnpilot_p_inoc_scaffold_900_curated_43
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43377..45005)
DNA (1629bp) protein (543aa)
UBA/THIF-type NAD/FAD-binding protein n=5 Tax=Proteobacteria RepID=N4VUR2_PSEAI
Thiamine biosynthesis protein ThiF {ECO:0000313|EMBL:EPX98532.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
UBA/THIF-type NAD/FAD-binding protein
scnpilot_p_inoc_scaffold_900_curated_44
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45002..46144)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=6 Tax=Proteobacteria RepID=N4VX52_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:EPX98531.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
hypothetical protein
scnpilot_p_inoc_scaffold_900_curated_45
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46138..47139)
DNA (1002bp) protein (334aa)
Patatin n=5 Tax=Proteobacteria RepID=N4WAR0_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:EPD45090.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
patatin
scnpilot_p_inoc_scaffold_900_curated_46
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47145..47369)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WRV2_VEREI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM60359.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
scnpilot_p_inoc_scaffold_900_curated_47
Thauera aminoaromatica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47645..48031
DNA (387bp) protein (129aa)
XRE family transcriptional regulator n=5 Tax=Proteobacteria RepID=N4W6F2_PSEAI
XRE family transcriptional regulator {ECO:0000313|EMBL:ENO89008.1}; TaxID=1234381 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera aminoaromatica S2.;"
XRE family transcriptional regulator
scnpilot_p_inoc_scaffold_900_curated_48
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48034..48903
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WRV0_VEREI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM60357.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
scnpilot_p_inoc_scaffold_900_curated_49
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48971..49660)
DNA (690bp) protein (230aa)
hypothetical protein id=12552230 bin=BDI species=Delftia acidovorans genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:EPD42318.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
scnpilot_p_inoc_scaffold_900_curated_50
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49902..51113)
DNA (1212bp) protein (404aa)
helix-turn-helix family protein id=12552231 bin=BDI species=Burkholderia pseudomallei genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
helix-turn-helix family protein
Tax=BJP_08E140C01_Dechloromonas_61_78
scnpilot_p_inoc_scaffold_900_curated_51
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51094..51762)
DNA (669bp) protein (223aa)
hypothetical protein id=12552232 bin=BDI species=Burkholderia pseudomallei genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=BJP_08E140C01_Dechloromonas_61_78
scnpilot_p_inoc_scaffold_900_curated_52
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52004..52318)
DNA (315bp) protein (105aa)
higA-2; antitoxin HigA-2 id=12552233 bin=BDI species=Achromobacter piechaudii genus=Achromobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Antitoxin HigA-2 {ECO:0000313|EMBL:EJO30085.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii HLE.;"
higA-2; antitoxin HigA-2
scnpilot_p_inoc_scaffold_900_curated_53
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52315..52659)
DNA (345bp) protein (115aa)
hypothetical protein id=12552234 bin=BDI species=Pseudomonas pseudoalcaligenes genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Cytotoxic translational repressor of toxin-antitoxin stability system {ECO:0000313|EMBL:ELS25956.1}; TaxID=1149133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes KF707.;"
hypothetical protein
scnpilot_p_inoc_scaffold_900_curated_54

Not on your lists

comp(52850..54061)
DNA (1212bp) protein (404aa)
Tyrosine recombinase n=1 Tax=uncultured bacterium RepID=C6KVI1_9BACT
Tyrosine recombinase {ECO:0000313|EMBL:BAH89979.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
integrase family protein
scnpilot_p_inoc_scaffold_900_curated_55
Curvibacter putative symbiont of Hydra magnipapillata, Curvibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54284..54889)
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y7K6_9BURK
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:CBA27196.1}; TaxID=667019 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter.;" source="Curvibacter putative symbiont of Hydra magnipapillata.;"
scnpilot_p_inoc_scaffold_900_curated_56
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55060..56178)
DNA (1119bp) protein (373aa)
ribonucleoside-diphosphate reductase (EC:1.17.4.1); K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
Ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q8Q0_ACIAP
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_900_curated_57
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56320..59211)
DNA (2892bp) protein (964aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
ribonucleoside-diphosphate reductase, alpha subunit; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Ribonucleoside-diphosphate reductase n=2 Tax=Alicycliphilus denitrificans RepID=E8TR26_ALIDB
scnpilot_p_inoc_scaffold_900_curated_58
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59618..60244)
DNA (627bp) protein (209aa)
N-acetyl-anhydromuranmyl-L-alanine amidase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I520_9BURK
N-acetyl-anhydromuranmyl-L-alanine amidase
N-acetyl-anhydromuranmyl-L-alanine amidase {ECO:0000313|EMBL:AFU47660.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_900_curated_59
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60222..61709)
DNA (1488bp) protein (496aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TKH6_ACIAC
Fis family two component sigma-54 specific transcriptional regulator; K02667 two-component system, NtrC family, response regulator PilR
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABM31464.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scnpilot_p_inoc_scaffold_900_curated_60
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61717..63411)
DNA (1695bp) protein (565aa)
histidine kinase n=1 Tax=Acidovorax radicis RepID=UPI00023777CB
integral membrane sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
Displaying items 31-60 of 64 in total

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