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scnpilot_p_inoc_scaffold_2243_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2243_curated_1
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..124)
DNA (123bp) protein (41aa)
transposase IS1246 n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037F40CE
Transposase IS4 family protein {ECO:0000313|EMBL:GAO21884.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
transposase IS4 family protein
scnpilot_p_inoc_scaffold_2243_curated_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(534..1169)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WVX4_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43561.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
acetyltransferase
scnpilot_p_inoc_scaffold_2243_curated_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1166..2815)
DNA (1650bp) protein (550aa)
glycoside hydrolase family protein (EC:2.4.1.-); K00754 [EC:2.4.1.-]
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X075_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43560.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_p_inoc_scaffold_2243_curated_4
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2812..5100)
DNA (2289bp) protein (763aa)
hypothetical protein n=1 Tax=Pseudomonas sp. 45MFCol3.1 RepID=UPI00035E04D4
Glycosytransferase {ECO:0000313|EMBL:KJZ56981.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
group 1 glycosyl transferase
scnpilot_p_inoc_scaffold_2243_curated_5
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5106..6236)
DNA (1131bp) protein (377aa)
putative acyltransferase (EC:2.3.1.-)
UPI0003CE1333 related cluster n=1 Tax=unknown RepID=UPI0003CE1333
Uncharacterized protein {ECO:0000313|EMBL:ESY91335.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
scnpilot_p_inoc_scaffold_2243_curated_6
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6233..6994)
DNA (762bp) protein (254aa)
RfbE, O-antigen export system ATP-binding protein RfbE n=1 Tax=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) RepID=A0KMA2_AERHH
RfbE, O-antigen export system ATP-binding protein RfbE; K09691 lipopolysaccharide transport system ATP-binding protein
RfbE, O-antigen export system ATP-binding protein RfbE {ECO:0000313|EMBL:ABK36277.1}; TaxID=380703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 /; JCM 1027 / KCTC 2358 / NCIMB 9240).;"
scnpilot_p_inoc_scaffold_2243_curated_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6991..7770)
DNA (780bp) protein (260aa)
Lipopolysaccharide transport system permease n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WUS5_DELAC
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
ABC transporter permease; K09690 lipopolysaccharide transport system permease protein
scnpilot_p_inoc_scaffold_2243_curated_8
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7770..9227)
DNA (1458bp) protein (486aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI00036CB914
Uncharacterized protein {ECO:0000313|EMBL:KIF55920.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
scnpilot_p_inoc_scaffold_2243_curated_9
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9224..10318)
DNA (1095bp) protein (365aa)
Glutamine--scyllo-inositol transaminase {ECO:0000313|EMBL:EGV20021.1}; EC=2.6.1.50 {ECO:0000313|EMBL:EGV20021.1};; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
aminotransferase DegT n=1 Tax=Acidovorax radicis RepID=UPI000237864E
Perosamine synthetase, Per protein; K13010 perosamine synthetase
scnpilot_p_inoc_scaffold_2243_curated_10
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10328..11428)
DNA (1101bp) protein (367aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47); K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47]
GDP-mannose 4,6-dehydratase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WVW9_DELAC
scnpilot_p_inoc_scaffold_2243_curated_11
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11473..12945)
DNA (1473bp) protein (491aa)
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:EZP53995.1}; EC=2.7.7.13 {ECO:0000313|EMBL:EZP53995.1};; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase (EC:2.7.7.13); K16011 mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
mannose-1-phosphate guanyltransferase n=1 Tax=Acidovorax avenae RepID=UPI00036B5146
scnpilot_p_inoc_scaffold_2243_curated_12
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12942..13310)
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZX3_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL22120.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein; K09153 hypothetical protein
Displaying 12 items

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