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scnpilot_p_inoc_scaffold_2281_curated

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2281_curated_1
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..375
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003723BDA
Uncharacterized protein {ECO:0000313|EMBL:GAD21326.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2281_curated_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

456..830
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036EB2DD
Uncharacterized protein {ECO:0000313|EMBL:GAD21327.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_p_inoc_scaffold_2281_curated_3
unknown

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comp(904..1929)
DNA (1026bp) protein (342aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2281_curated_4
unknown

Not on your lists

comp(1926..3089)
DNA (1164bp) protein (388aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2281_curated_5
Acinetobacter sp. NIPH 1859, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3448..4575)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Acinetobacter sp. NIPH 1859 RepID=N9PRZ9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENX36349.1}; TaxID=1217695 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. NIPH 1859.;"
scnpilot_p_inoc_scaffold_2281_curated_6
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4854..5261)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037B1A10
Uncharacterized protein {ECO:0000313|EMBL:GAD21328.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
regulatory protein LuxR
scnpilot_p_inoc_scaffold_2281_curated_7
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5258..5890)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037B1A10
Uncharacterized protein {ECO:0000313|EMBL:GAD21328.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
regulatory protein LuxR
scnpilot_p_inoc_scaffold_2281_curated_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5973..7073)
DNA (1101bp) protein (367aa)
UPI00039AC74E related cluster n=1 Tax=unknown RepID=UPI00039AC74E
DNA-binding HTH domain-containing proteins {ECO:0000313|EMBL:GAD21329.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
regulatory protein LuxR
scnpilot_p_inoc_scaffold_2281_curated_9
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7251..8303)
DNA (1053bp) protein (351aa)
adenosine deaminase (EC:3.5.4.4)
adenosine deaminase n=1 Tax=Acidovorax radicis RepID=UPI00023769CA
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_2281_curated_10
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8403..10808)
DNA (2406bp) protein (802aa)
peptidase S45, penicillin amidase; K07116 acyl-homoserine-lactone acylase [EC:3.5.1.97]
acylase n=1 Tax=Acidovorax avenae RepID=UPI000315F2C8
Peptidase S45, penicillin amidase {ECO:0000313|EMBL:ABM31733.1}; Flags: Precursor;; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scnpilot_p_inoc_scaffold_2281_curated_11
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11001..12164)
DNA (1164bp) protein (388aa)
membrane protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036EF33E
Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein {ECO:0000313|EMBL:GAD20847.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
basic membrane lipoprotein; K02058 simple sugar transport system substrate-binding protein
scnpilot_p_inoc_scaffold_2281_curated_12
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12255..13391)
DNA (1137bp) protein (379aa)
Basic membrane lipoprotein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MCU8_ACIET
basic membrane lipoprotein
Basic membrane lipoprotein {ECO:0000313|EMBL:ACM33880.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_p_inoc_scaffold_2281_curated_13
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13428..14348)
DNA (921bp) protein (307aa)
Inner-membrane translocator n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7E8_ACIDE
Inner-membrane translocator {ECO:0000313|EMBL:EER59601.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
ABC transporter permease
scnpilot_p_inoc_scaffold_2281_curated_14
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14348..15421)
DNA (1074bp) protein (358aa)
Inner-membrane translocator n=2 Tax=Alicycliphilus denitrificans RepID=E8TRM3_ALIDB
ABC transporter permease; K02057 simple sugar transport system permease protein
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEB85893.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_p_inoc_scaffold_2281_curated_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15408..17036)
DNA (1629bp) protein (543aa)
monosaccharide-transporting ATPase id=12551470 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
monosaccharide-transporting ATPase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_2281_curated_16
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17256..18737
DNA (1482bp) protein (494aa)
Molybdopterin dehydrogenase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4Q8_9BURK
Molybdopterin dehydrogenase {ECO:0000313|EMBL:EHL20392.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
molybdopterin dehydrogenase
scnpilot_p_inoc_scaffold_2281_curated_17
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18734..21085
DNA (2352bp) protein (784aa)
xanthine dehydrogenase, molybdopterin-binding subunit (EC:1.17.1.4); K13482 xanthine dehydrogenase large subunit [EC:1.17.1.4]
Xanthine dehydrogenase, molybdopterin binding subunit {ECO:0000313|EMBL:ACM33885.1}; EC=1.17.1.4 {ECO:0000313|EMBL:ACM33885.1};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Xanthine dehydrogenase, molybdopterin binding subunit n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MCV3_ACIET
scnpilot_p_inoc_scaffold_2281_curated_18
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21148..22017
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI000380A024
Putative Transcriptional regulator, AraC family {ECO:0000313|EMBL:CDX34462.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_2281_curated_19

Not on your lists

22029..22337
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Ralstonia sp. AU12-08 RepID=S9S5G1_9RALS
Marine sediment metagenome DNA, contig: S03H2_L00380 {ECO:0000313|EMBL:GAH36458.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
antibiotic biosynthesis monooxygenase
scnpilot_p_inoc_scaffold_2281_curated_20
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22356..23093
DNA (738bp) protein (246aa)
Abortive infection protein n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6X3Y0_9ALTE
Abortive infection protein {ECO:0000313|EMBL:EYR67793.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
abortive infection protein
scnpilot_p_inoc_scaffold_2281_curated_21
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23094..25133)
DNA (2040bp) protein (680aa)
PAS/PAC sensor-containing diguanylate cyclase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BY56_9BURK
PAS/PAC sensor-containing diguanylate cyclase {ECO:0000313|EMBL:EHL22507.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
PAS/PAC sensor-containing diguanylate cyclase
scnpilot_p_inoc_scaffold_2281_curated_22
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25482..26105)
DNA (624bp) protein (208aa)
Transcriptional regulator, Crp/Fnr family n=2 Tax=Acidovorax RepID=A1WAF6_ACISJ
Crp/Fnr family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ACM33887.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_p_inoc_scaffold_2281_curated_23
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26192..27397)
DNA (1206bp) protein (402aa)
membrane protein n=1 Tax=Acidovorax radicis RepID=UPI00023769D7
Membrane protein {ECO:0000313|EMBL:KJA10199.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2281_curated_24
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27569..28456)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0V9_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44794.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_2281_curated_25
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28469..28951
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI00023769D9
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_2281_curated_26
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29079..30188)
DNA (1110bp) protein (370aa)
Transposase IS4 family protein n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E8G3_9GAMM
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:EGV27609.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus drewsii AZ1.;"
scnpilot_p_inoc_scaffold_2281_curated_27
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30267..30617)
DNA (351bp) protein (117aa)
5-hydroxyisourate hydrolase {ECO:0000256|RuleBase:RU361270}; Short=HIU hydrolase {ECO:0000256|RuleBase:RU361270};; Short=HIUHase {ECO:0000256|RuleBase:RU361270};; EC=3.5.2.17 {ECO:0000256|RuleBase:RU361270};; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
5-hydroxyisourate hydrolase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVF6_9BURK
hydroxyisourate hydrolase
scnpilot_p_inoc_scaffold_2281_curated_28
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30743..31309)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002376A16
hypothetical protein; K02221 YggT family protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_2281_curated_29
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31370..32005
DNA (636bp) protein (212aa)
peptidase S16 n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000362BC38
uncharacterized LOC100498456
Peptidase S16 lon domain protein {ECO:0000313|EMBL:GAD24348.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_p_inoc_scaffold_2281_curated_30
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32002..33156
DNA (1155bp) protein (385aa)
Glycosyl transferase, group 1 n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TLG3_ACIAC
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABM31801.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
Displaying items 1-30 of 45 in total

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