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scnpilot_p_inoc_scaffold_1950_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1950_curated_1
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..135)
DNA (135bp) protein (45aa)
succinate dehydrogenase subunit A (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1]
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
succinate dehydrogenase flavoprotein subunit n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000370F4DA
scnpilot_p_inoc_scaffold_1950_curated_2
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(159..524)
DNA (366bp) protein (122aa)
succinate dehydrogenase subunit D (EC:1.3.5.1); K00242 succinate dehydrogenase membrane anchor subunit
Succinate dehydrogenase subunit D {ECO:0000313|EMBL:ABM42935.1}; EC=1.3.5.1 {ECO:0000313|EMBL:ABM42935.1};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Succinate dehydrogenase subunit D n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W9L0_ACISJ
scnpilot_p_inoc_scaffold_1950_curated_3
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(554..988)
DNA (435bp) protein (145aa)
succinate dehydrogenase subunit C (EC:1.3.5.1); K00241 succinate dehydrogenase cytochrome b556 subunit
Succinate dehydrogenase subunit C {ECO:0000313|EMBL:ABM42934.1}; EC=1.3.5.1 {ECO:0000313|EMBL:ABM42934.1};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Succinate dehydrogenase subunit C n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W9K9_ACISJ
scnpilot_p_inoc_scaffold_1950_curated_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1141..1929)
DNA (789bp) protein (263aa)
GntR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW30_9BURK
HTH-type transcriptional regulator frlR-like
GntR family transcriptional regulator {ECO:0000313|EMBL:AFU47078.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_1950_curated_5
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2137..3123
DNA (987bp) protein (329aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
malate dehydrogenase; K00024 malate dehydrogenase [EC:1.1.1.37]
malate dehydrogenase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003659E50
scnpilot_p_inoc_scaffold_1950_curated_6
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3309..4322
DNA (1014bp) protein (338aa)
Citrate lyase beta subunit n=1 Tax=Acidovorax sp. CF316 RepID=J1ERG6_9BURK
uncharacterized LOC100488931
Citrate lyase beta subunit {ECO:0000313|EMBL:EJE54806.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
scnpilot_p_inoc_scaffold_1950_curated_7
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4319..4924
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000374BB78
Uncharacterized protein {ECO:0000313|EMBL:GAD21380.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1950_curated_8
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5017..7608
DNA (2592bp) protein (864aa)
bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase (EC:4.2.1.3); K01682 aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
Aconitate hydratase B {ECO:0000256|PIRNR:PIRNR036687}; EC=4.2.1.3 {ECO:0000256|PIRNR:PIRNR036687};; EC=4.2.1.99 {ECO:0000256|PIRNR:PIRNR036687};; 2-methylisocitrate dehydratase {ECO:0000256|PIRNR:PIRNR036687}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Aconitate hydratase 2 n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W9K3_ACISJ
scnpilot_p_inoc_scaffold_1950_curated_9
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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7833..9035
DNA (1203bp) protein (401aa)
integrase n=2 Tax=Gammaproteobacteria RepID=UPI0003B5F4A6
integrase-tyrosine recombinase protein
Integrase-tyrosine recombinase protein {ECO:0000313|EMBL:AFT71010.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5).;"
scnpilot_p_inoc_scaffold_1950_curated_10
Pseudomonas sp. MRSN12121, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9032..10099
DNA (1068bp) protein (356aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=L1LVQ6_PSEPU
Uncharacterized protein {ECO:0000313|EMBL:AJO79077.1}; TaxID=1611770 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. MRSN12121.;"
hypothetical protein rbh
scnpilot_p_inoc_scaffold_1950_curated_11
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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10443..10952
DNA (510bp) protein (170aa)
RadC-like protein n=1 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0CGY1_ALCDB
RadC-like protein
RadC-like protein {ECO:0000313|EMBL:AFT71012.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5).;"
scnpilot_p_inoc_scaffold_1950_curated_12
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11023..11739)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0CEF0_ALCDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFT71013.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5).;"
scnpilot_p_inoc_scaffold_1950_curated_13
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11742..14624)
DNA (2883bp) protein (961aa)
N-6 DNA methylase n=1 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0CBS0_ALCDB
N-6 DNA methylase
N-6 DNA methylase {ECO:0000313|EMBL:AFT71014.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5).;"
scnpilot_p_inoc_scaffold_1950_curated_14
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14660..14857)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0CF64_ALCDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFT71015.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5).;"
Displaying 14 items

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