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scnpilot_p_inoc_scaffold_1365_curated

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1365_curated_1
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..1099
DNA (1098bp) protein (366aa)
hypothetical protein id=12550636 bin=BDI species=Lautropia mirabilis genus=Lautropia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1365_curated_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1166..1867
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G601_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB86482.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_p_inoc_scaffold_1365_curated_3
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1864..2256
DNA (393bp) protein (131aa)
UPF0225 protein Alide_3818 n=2 Tax=Alicycliphilus denitrificans RepID=E8TSS7_ALIDB
hypothetical protein; K09858 SEC-C motif domain protein
UPF0225 protein ALISP_1232 {ECO:0000256|HAMAP-Rule:MF_00612}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_1365_curated_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2318..3850)
DNA (1533bp) protein (511aa)
Extracellular solute-binding protein family 5 n=2 Tax=Alicycliphilus denitrificans RepID=E8TSS4_ALIDB
ABC transporter substrate-binding protein
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AEB86478.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_p_inoc_scaffold_1365_curated_5
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3932..5935
DNA (2004bp) protein (668aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037D7712
Uncharacterized protein {ECO:0000313|EMBL:GAD21761.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
PAS/PAC sensor-containing diguanylate cyclase
scnpilot_p_inoc_scaffold_1365_curated_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6005..6688
DNA (684bp) protein (228aa)
HAD family hydrolase id=12550634 bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
HAD family hydrolase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1365_curated_7
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6682..8085
DNA (1404bp) protein (468aa)
patatin n=1 Tax=Acidovorax radicis RepID=UPI0002376A7A
patatin
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_1365_curated_8
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8430..9497)
DNA (1068bp) protein (356aa)
Transcriptional regulator, AraC family n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MG84_ACIET
AraC family transcriptional regulator {ECO:0000313|EMBL:KJA11234.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_1365_curated_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9610..11283
DNA (1674bp) protein (558aa)
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
Fatty-acyl-CoA synthetase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W5P7_DELAC
Fatty-acyl-CoA synthetase {ECO:0000313|EMBL:EPD34993.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_p_inoc_scaffold_1365_curated_10
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11297..12901
DNA (1605bp) protein (535aa)
methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like; K01969 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
Methylcrotonoyl-CoA carboxylase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TSQ9_ALIDB
Acetyl-CoA carboxylase {ECO:0000313|EMBL:GAO25070.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_1365_curated_11
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12919..13428
DNA (510bp) protein (170aa)
DinB family protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T2N6_ACIDE
dinb family protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_1365_curated_12
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13436..14215
DNA (780bp) protein (260aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:KJA11139.1}; EC=4.2.1.17 {ECO:0000313|EMBL:KJA11139.1};; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
enoyl-CoA hydratase (EC:4.2.1.17); K13766 methylglutaconyl-CoA hydratase [EC:4.2.1.18]
Enoyl-CoA hydratase/isomerase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WC95_ACISJ
scnpilot_p_inoc_scaffold_1365_curated_13
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14218..14937
DNA (720bp) protein (240aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4X5_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL20354.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1365_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14938..16959
DNA (2022bp) protein (674aa)
3-methylcrotonoyl-CoA carboxylase subunit alpha n=1 Tax=Acidovorax sp. KKS102 RepID=K0I922_9BURK
3-methylcrotonoyl-CoA carboxylase subunit alpha {ECO:0000313|EMBL:AFU47799.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
3-methylcrotonoyl-CoA carboxylase subunit alpha
scnpilot_p_inoc_scaffold_1365_curated_15
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17035..18636
DNA (1602bp) protein (534aa)
Sulfatase n=1 Tax=Comamonas testosteroni S44 RepID=D8D4U0_COMTE
Sulfatase {ECO:0000313|EMBL:EXU79644.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
sulfatase
scnpilot_p_inoc_scaffold_1365_curated_16
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18657..19565
DNA (909bp) protein (303aa)
Pyruvate carboxyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8TS28_ALIDB
hydroxymethylglutaryl-CoA lyase, mitochondrial-like
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:GAO25063.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_1365_curated_17
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19645..21063)
DNA (1419bp) protein (473aa)
RND efflux system, outer membrane lipoprotein n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RPU1_COMTE
RND efflux system, outer membrane lipoprotein {ECO:0000313|EMBL:EHN65836.1}; TaxID=1009852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni ATCC 11996.;"
RND efflux system outer membrane lipoprotein
scnpilot_p_inoc_scaffold_1365_curated_18
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21060..24203)
DNA (3144bp) protein (1048aa)
multidrug transporter n=1 Tax=Comamonas sp. B-9 RepID=UPI000395B74B
Multidrug transporter {ECO:0000313|EMBL:KGH30488.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
transporter hydrophobe/amphiphile efflux-1; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
scnpilot_p_inoc_scaffold_1365_curated_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24217..25485)
DNA (1269bp) protein (423aa)
RND family efflux transporter MFP subunit n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5D5_9BURK
RND family efflux transporter MFP subunit
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:AFU47790.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_1365_curated_20
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25600..27315)
DNA (1716bp) protein (572aa)
diguanylate cyclase id=12553012 bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
diguanylate cyclase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1365_curated_21
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27370..27852
DNA (483bp) protein (161aa)
UPI00039E4774 related cluster n=1 Tax=unknown RepID=UPI00039E4774
Prolyl-tRNA synthetase {ECO:0000313|EMBL:GAD21741.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
prolyl-tRNA synthetase
scnpilot_p_inoc_scaffold_1365_curated_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27849..28109
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TS26_ALIDB
hypothetical protein; K06938
Uncharacterized protein {ECO:0000313|EMBL:ADV01503.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_p_inoc_scaffold_1365_curated_23
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28301..28933
DNA (633bp) protein (211aa)
DSBA oxidoreductase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AR05_DELSC
uncharacterized LOC100492706
DSBA oxidoreductase {ECO:0000313|EMBL:EZP57899.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
scnpilot_p_inoc_scaffold_1365_curated_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28944..30071
DNA (1128bp) protein (376aa)
CBS domain-containing protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WUS9_DELAC
CBS domain-containing protein {ECO:0000313|EMBL:EPD41735.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase; K07182 CBS domain-containing protein
Displaying 24 items

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