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scnpilot_p_inoc_scaffold_2013_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2013_curated_1
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..105)
DNA (105bp) protein (35aa)
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TP06_ACIAC
Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer; K03776 aerotaxis receptor
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor {ECO:0000313|EMBL:ABM32694.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scnpilot_p_inoc_scaffold_2013_curated_2
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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501..4535
DNA (4035bp) protein (1345aa)
putative nitrate/sulfite reductase (EC:1.7.99.4 1.8.1.2)
Sulfite reductase, alpha subunit (Flavoprotein) n=1 Tax=Methylomicrobium album BG8 RepID=H8GIK7_METAL
Sulfite reductase, alpha subunit (Flavoprotein) {ECO:0000313|EMBL:EIC29034.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium album BG8.;"
scnpilot_p_inoc_scaffold_2013_curated_3
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5043..6290
DNA (1248bp) protein (416aa)
Twin-arginine translocation pathway signal n=2 Tax=Delftia RepID=A9BVE8_DELAS
twin-arginine translocation pathway signal protein; K15576 nitrate/nitrite transport system substrate-binding protein
Twin-arginine translocation pathway signal protein {ECO:0000313|EMBL:AEF91259.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
scnpilot_p_inoc_scaffold_2013_curated_4
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6304..7224
DNA (921bp) protein (307aa)
Nitrate ABC transporter, inner membrane subunit n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MC53_ACIET
nitrate ABC transporter permease; K15577 nitrate/nitrite transport system permease protein
Nitrate ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ACM33758.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_p_inoc_scaffold_2013_curated_5
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7221..8024
DNA (804bp) protein (268aa)
nitrate ABC transporter ATPases C and D; K15578 nitrate/nitrite transport system ATP-binding protein [EC:3.6.3.-]
Nitrate ABC transporter, ATPase subunits C and D n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W9P9_ACISJ
Nitrate ABC transporter, ATPase subunits C and D {ECO:0000313|EMBL:ABM42974.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_p_inoc_scaffold_2013_curated_6
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8247..9167
DNA (921bp) protein (307aa)
Glycosyl transferase, family 3 n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6B0Z4_DELSC
Glycosyl transferase family 3 {ECO:0000313|EMBL:EZP55042.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
glycosyl transferase family protein
scnpilot_p_inoc_scaffold_2013_curated_7
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9164..9922
DNA (759bp) protein (253aa)
uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107); K02303 uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
Uroporphyrinogen-III C-methyltransferase {ECO:0000313|EMBL:ABM42984.1}; EC=2.1.1.107 {ECO:0000313|EMBL:ABM42984.1};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Uroporphyrinogen-III C-methyltransferase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W9Q9_ACISJ
scnpilot_p_inoc_scaffold_2013_curated_8
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10069..11253
DNA (1185bp) protein (395aa)
Extracellular ligand-binding receptor n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MC66_ACIET
extracellular ligand-binding receptor
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:ABM42986.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_p_inoc_scaffold_2013_curated_9
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11296..12546
DNA (1251bp) protein (417aa)
HI0933 family protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MC67_ACIET
hypothetical protein; K07007
HI0933 family protein {ECO:0000313|EMBL:ACM33772.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_p_inoc_scaffold_2013_curated_10
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12543..13715)
DNA (1173bp) protein (391aa)
diguanylate cyclase n=1 Tax=Acidovorax radicis RepID=UPI0002375F47
Diguanylate cyclase {ECO:0000313|EMBL:BAO28130.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
diguanylate cyclase domain-containing protein
scnpilot_p_inoc_scaffold_2013_curated_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13924..14136
DNA (213bp) protein (71aa)
30S ribosomal protein S21 n=14 Tax=root RepID=RS21_ACIAC
rpsU; 30S ribosomal protein S21; K02970 small subunit ribosomal protein S21
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_2013_curated_12
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14216..14662
DNA (447bp) protein (149aa)
aspartyl-tRNA amidotransferase subunit B n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000364D9DA
Uncharacterized protein {ECO:0000313|EMBL:GAD21076.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
GatB/YqeY domain-containing protein
scnpilot_p_inoc_scaffold_2013_curated_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14727..15029)
DNA (303bp) protein (101aa)
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I7L0_9BURK
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:AFU47204.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying 13 items

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