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scnpilot_p_inoc_scaffold_838_curated

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_838_curated_1
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..2774
DNA (2772bp) protein (924aa)
DNA polymerase I {ECO:0000313|EMBL:ABM32514.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABM32514.1};; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
DNA polymerase I n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TNH6_ACIAC
DNA polymerase I-like
scnpilot_p_inoc_scaffold_838_curated_2
unknown

Not on your lists

2789..2977
DNA (189bp) protein (63aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_838_curated_3
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3019..3912
DNA (894bp) protein (298aa)
carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45]
carboxymethylenebutenolidase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003759435
Dienelactone hydrolase and related enzymes {ECO:0000313|EMBL:GAD22474.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_p_inoc_scaffold_838_curated_4
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3983..4885
DNA (903bp) protein (301aa)
dihydroorotate dehydrogenase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035DC8EE
Predicted divalent heavy-metal cations transporter {ECO:0000313|EMBL:GAD22473.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
zinc/iron permease
scnpilot_p_inoc_scaffold_838_curated_5
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4956..5852)
DNA (897bp) protein (299aa)
AraC family transcriptional regulator n=1 Tax=Chryseobacterium taeanense RepID=UPI0002E3DE71
AraC family transcriptional regulator {ECO:0000313|EMBL:KEH14793.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_838_curated_6
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5974..7962
DNA (1989bp) protein (663aa)
TonB-dependent receptor n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T6I5_ALCXX
TonB-dependent receptor {ECO:0000313|EMBL:EGP44037.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
TonB-dependent receptor
scnpilot_p_inoc_scaffold_838_curated_7
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7974..8981
DNA (1008bp) protein (336aa)
UPI0003D3E55B related cluster n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI0003D3E55B
Methyltransferase type 12 {ECO:0000313|EMBL:GAD20875.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
type 12 methyltransferase
scnpilot_p_inoc_scaffold_838_curated_8
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8974..10188
DNA (1215bp) protein (405aa)
Major facilitator superfamily MFS_1 n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TJX0_ACIAC
major facilitator superfamily transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABM31258.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scnpilot_p_inoc_scaffold_838_curated_9
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10241..10999)
DNA (759bp) protein (253aa)
LytTR family transcriptional regulator n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037FBBCE
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:GAD22466.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
response regulator receiver protein
scnpilot_p_inoc_scaffold_838_curated_10
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11062..12006)
DNA (945bp) protein (315aa)
integral membrane sensor signal transduction histidine kinase; K08082 two-component system, LytT family, sensor histidine kinase AlgZ [EC:2.7.13.3]
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q8C1_ACIAP
Histidine kinase {ECO:0000313|EMBL:KJA10260.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
scnpilot_p_inoc_scaffold_838_curated_11
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12161..13633
DNA (1473bp) protein (491aa)
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BVI3_9BURK
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_838_curated_12
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13746..15692)
DNA (1947bp) protein (649aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037574B8
Alkyl sulfatase-like hydrolase {ECO:0000313|EMBL:EHR72875.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
metallo-beta-lactamase
scnpilot_p_inoc_scaffold_838_curated_13

Not on your lists

comp(15721..17334)
DNA (1614bp) protein (538aa)
choline dehydrogenase; K00108 choline dehydrogenase [EC:1.1.99.1] rbh
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI000367F0E5
Putative dehydrogenase {ECO:0000313|EMBL:CAJ43303.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_p_inoc_scaffold_838_curated_14
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17331..18797)
DNA (1467bp) protein (489aa)
aldehyde dehydrogenase; K00154 coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
Aldehyde dehydrogenase n=1 Tax=Acinetobacter sp. NIPH 809 RepID=N8QUE7_9GAMM
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
scnpilot_p_inoc_scaffold_838_curated_15
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18969..20063
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Acinetobacter calcoaceticus NIPH 13 RepID=N8PFW9_ACICA
AraC family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
scnpilot_p_inoc_scaffold_838_curated_16
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20063..21031
DNA (969bp) protein (323aa)
Uncharacterized protein UPF0065 n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WB08_ACISJ
hypothetical protein
Uncharacterized protein UPF0065 {ECO:0000313|EMBL:ABM43433.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_p_inoc_scaffold_838_curated_17
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21219..22583)
DNA (1365bp) protein (455aa)
beta-Casp domain-containing protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000379254C
Predicted exonuclease of the beta-lactamase fold involved in RNA processing {ECO:0000313|EMBL:GAD24318.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
RNA-metabolising metallo-beta-lactamase; K07576 metallo-beta-lactamase family protein
scnpilot_p_inoc_scaffold_838_curated_18
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22694..23827)
DNA (1134bp) protein (378aa)
Chaperone protein DnaJ n=2 Tax=Alicycliphilus denitrificans RepID=E8TYF1_ALIDB
chaperone protein DnaJ; K03686 molecular chaperone DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_p_inoc_scaffold_838_curated_19
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23926..25884)
DNA (1959bp) protein (653aa)
Chaperone protein DnaK n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4U8_ACIDE
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
dnaK; molecular chaperone DnaK
scnpilot_p_inoc_scaffold_838_curated_20
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25967..26509)
DNA (543bp) protein (181aa)
Protein GrpE n=1 Tax=Acidovorax sp. (strain JS42) RepID=GRPE_ACISJ
heat shock protein GrpE; K03687 molecular chaperone GrpE
Protein GrpE {ECO:0000255|HAMAP-Rule:MF_01151}; HSP-70 cofactor {ECO:0000255|HAMAP-Rule:MF_01151}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_p_inoc_scaffold_838_curated_21
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


26737..27105
DNA (369bp) protein (123aa)
30S ribosomal protein S6 n=1 Tax=Acidovorax sp. KKS102 RepID=K0I876_9BURK
rpsF; 30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000256|SAAS:SAAS00020539}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
scnpilot_p_inoc_scaffold_838_curated_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27121..27411
DNA (291bp) protein (97aa)
Single-strand binding protein/Primosomal replication protein n n=2 Tax=Alicycliphilus denitrificans RepID=E8TYE7_ALIDB
single-strand binding protein/Primosomal replication protein n; K02686 primosomal replication protein N
Primosomal replication protein n {ECO:0000256|SAAS:SAAS00194886}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_p_inoc_scaffold_838_curated_23
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


27430..27711
DNA (282bp) protein (94aa)
30S ribosomal protein S18 n=4 Tax=Comamonas testosteroni RepID=D0J1L5_COMT2
30S ribosomal protein S18-like
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=688245 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (strain CNB-2).;"
scnpilot_p_inoc_scaffold_838_curated_24
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


27724..28173
DNA (450bp) protein (150aa)
50S ribosomal protein L9 n=2 Tax=Acidovorax RepID=RL9_ACIET
rplI; 50S ribosomal protein l9; K02939 large subunit ribosomal protein L9
50S ribosomal protein L9 {ECO:0000255|HAMAP-Rule:MF_00503}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_p_inoc_scaffold_838_curated_25
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28283..29695
DNA (1413bp) protein (471aa)
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12]
Replicative DNA helicase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4V4_ACIDE
Replicative DNA helicase {ECO:0000313|EMBL:EER60510.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
scnpilot_p_inoc_scaffold_838_curated_26
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29763..30341
DNA (579bp) protein (193aa)
Uracil-DNA glycosylase superfamily n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QBA3_ACIAP
uncharacterized LOC100498459
Uracil-DNA glycosylase superfamily {ECO:0000313|EMBL:ADX44965.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scnpilot_p_inoc_scaffold_838_curated_27
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30313..31077
DNA (765bp) protein (255aa)
spermidine synthase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000366B98D
Spermidine synthase {ECO:0000313|EMBL:GAD22823.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scnpilot_p_inoc_scaffold_838_curated_28
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31106..32896
DNA (1791bp) protein (597aa)
Type II secretion system protein E n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QBA5_ACIAP
type II secretion system protein E; K02454 general secretion pathway protein E
Type II secretion system protein E {ECO:0000313|EMBL:ADX44967.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scnpilot_p_inoc_scaffold_838_curated_29
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33153..33641
DNA (489bp) protein (163aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4P5_9BURK
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EHL20379.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
scnpilot_p_inoc_scaffold_838_curated_30
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33645..35156
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T997_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER58953.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
Displaying items 1-30 of 33 in total

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