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scnpilot_p_inoc_scaffold_1409_curated

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1409_curated_1
unknown

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1..111
DNA (111bp) protein (37aa)
peptide deformylase 1-like
scnpilot_p_inoc_scaffold_1409_curated_2
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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108..920
DNA (813bp) protein (271aa)
AzlC family protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUV6_9BURK
AzlC family protein {ECO:0000313|EMBL:EHL23884.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
AzlC family protein
scnpilot_p_inoc_scaffold_1409_curated_3
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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917..1255
DNA (339bp) protein (113aa)
Branched-chain amino acid transport n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUV7_9BURK
Branched-chain amino acid transport {ECO:0000313|EMBL:EHL23885.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
branched-chain amino acid transport
scnpilot_p_inoc_scaffold_1409_curated_4
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1324..2517
DNA (1194bp) protein (398aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3]
phosphoglycerate kinase n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI00036AADD2
scnpilot_p_inoc_scaffold_1409_curated_5
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2731..3414
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TAL5_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER58485.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1409_curated_6
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3411..3971
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TAL6_ACIDE
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_1409_curated_7
Pseudomonas cichorii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4003..5763)
DNA (1761bp) protein (587aa)
hypothetical protein n=1 Tax=Pseudomonas agarici RepID=UPI000316CE65
uncharacterized LOC100496829
ABC transporter ATP-binding protein/permease {ECO:0000313|EMBL:AHF67324.1}; TaxID=1441629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas cichorii JBC1.;"
scnpilot_p_inoc_scaffold_1409_curated_8
Pseudomonas syringae group genomosp. 3, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5846..7603)
DNA (1758bp) protein (586aa)
ABC transporter, ATP-binding/permease protein n=1 Tax=Pseudomonas syringae pv. tomato T1 RepID=E2MGK6_PSEUB
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGK95858.1}; TaxID=323 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas syringae pv. tomato.;"
ABC transporter ATP-binding protein/permease; K06147 ATP-binding cassette, subfamily B, bacterial rbh
scnpilot_p_inoc_scaffold_1409_curated_9
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7600..8808)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Advenella kashmirensis W13003 RepID=V8QSZ7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ETF02455.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
Inner-membrane permease FptX, ferripyochelin
scnpilot_p_inoc_scaffold_1409_curated_10
Advenella mimigardefordensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8798..10837)
DNA (2040bp) protein (680aa)
Uncharacterized protein n=1 Tax=Advenella kashmirensis W13003 RepID=V8QR53_9BURK
TonB-dependent receptor Plug domain-containing protein {ECO:0000313|EMBL:AHG62996.1}; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella mimigardefordensis DPN7.;"
TonB-dependent receptor
scnpilot_p_inoc_scaffold_1409_curated_11
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10946..11878
DNA (933bp) protein (311aa)
AraC family transcriptional regulator n=1 Tax=Advenella kashmirensis W13003 RepID=V8QSM1_9BURK
AraC family transcriptional regulator {ECO:0000313|EMBL:ETF02325.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_1409_curated_12
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11944..13161)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Advenella kashmirensis W13003 RepID=V8QSZ7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ETF02455.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
transmembrane transport protein
scnpilot_p_inoc_scaffold_1409_curated_13
Advenella mimigardefordensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13161..15179)
DNA (2019bp) protein (673aa)
Uncharacterized protein n=1 Tax=Advenella kashmirensis W13003 RepID=V8QR53_9BURK
TonB-dependent receptor Plug domain-containing protein {ECO:0000313|EMBL:AHG62996.1}; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella mimigardefordensis DPN7.;"
TonB-dependent receptor
scnpilot_p_inoc_scaffold_1409_curated_14
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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15279..16196
DNA (918bp) protein (306aa)
Transcriptional regulator, AraC family n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2DWE8_9GAMM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EGV33648.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus drewsii AZ1.;"
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_1409_curated_15
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16294..17118
DNA (825bp) protein (275aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032220};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
orotidine 5''''-phosphate decarboxylase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037C2E6F
scnpilot_p_inoc_scaffold_1409_curated_16
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(17120..18259)
DNA (1140bp) protein (380aa)
FAD dependent oxidoreductase n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q3B0_ACIAP
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ADX46694.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scnpilot_p_inoc_scaffold_1409_curated_17
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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18445..20406
DNA (1962bp) protein (654aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUW4_9BURK
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EHL23892.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
methyl-accepting chemotaxis sensory transducer
scnpilot_p_inoc_scaffold_1409_curated_18
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20533..23109
DNA (2577bp) protein (859aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000368B95D
Uncharacterized protein {ECO:0000313|EMBL:GAD23604.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
diguanylate cyclase/phosphodiesterase with extracellular sensor
scnpilot_p_inoc_scaffold_1409_curated_19
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23218..26241)
DNA (3024bp) protein (1008aa)
excinuclease ABC subunit A n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003813016
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
excinuclease ABC subunit A; K03701 excinuclease ABC subunit A
scnpilot_p_inoc_scaffold_1409_curated_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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26579..27409
DNA (831bp) protein (277aa)
GCN5-related N-acetyltransferase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0W5_DELAS
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABX38428.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_p_inoc_scaffold_1409_curated_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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27402..27932
DNA (531bp) protein (177aa)
Tail Collar domain protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0W6_DELAS
tail collar domain-containing protein
Tail Collar domain protein {ECO:0000313|EMBL:ABX38429.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_p_inoc_scaffold_1409_curated_22
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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27961..28464
DNA (504bp) protein (168aa)
microcystin dependent protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002F55D72
Tail Collar domain-containing protein
Tail Collar domain protein {ECO:0000313|EMBL:AEF87834.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
scnpilot_p_inoc_scaffold_1409_curated_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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28481..29038
DNA (558bp) protein (186aa)
Tail Collar domain protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0W8_DELAS
tail collar domain-containing protein
Tail Collar domain protein {ECO:0000313|EMBL:ABX38431.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_p_inoc_scaffold_1409_curated_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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29210..30547
DNA (1338bp) protein (446aa)
Cell surface receptor IPT/TIG domain protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0W9_DELAS
Ig family protein
IPTL-CTERM sorting domain protein {ECO:0000313|EMBL:KFJ14091.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
Displaying 24 items

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