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scnpilot_p_inoc_scaffold_2341_curated_3

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 1180..2652

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system outer membrane lipoprotein NodT n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJ61_THIDA similarity UNIREF
DB: UNIREF100
  • Identity: 52.5
  • Coverage: 499.0
  • Bit_score: 457
  • Evalue 1.40e-125
RND efflux system outer membrane lipoprotein NodT similarity KEGG
DB: KEGG
  • Identity: 52.5
  • Coverage: 499.0
  • Bit_score: 457
  • Evalue 4.50e-126
RND efflux system outer membrane lipoprotein NodT {ECO:0000313|EMBL:AAZ97309.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.5
  • Coverage: 499.0
  • Bit_score: 457
  • Evalue 2.00e-125

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1473
ATGCGTCCTCCTGCCCCCGCCGTCTCGCTTCCTTTGGGGGGCGCCCATGTCCGCATTCTCACCATGGCCCTGGGCTGCCTGCTCGCGGCATGGCTGACGGGCTGCGCCAGCAGCCGCCAGGAGGCGGCCCCTCCTGCCGCCGTGGCACCCGATGATGCTCCGGCACCCTGGAGCGACGGCCCGCGTCAGCGGGCCGCTACGCCCCCGCGCGTCGCGGGACTGGCACTGCCCGGCCCCTGGTGGGAAAGCCTGCAGTCGCCAGCGCTGAGCGCACTGATCGCCCAGGCCCAGGCCGCCAGCCCCACGCTGGCCGCCGCCGAGGCGGCGCTGCGCCAGGCCGAGGCCCTGCAGAACGCCCAAGCGGCCATCACCGCGCAGCCCCAGTTCGACGCCACCGTCGGCGCGCAGCGCCAGCACACCTCCCCTGCTGCCCTGGGGCAAAGTGGCGAGGGCCGCAGTTTCAGCCTGTACAGCGCGGGCCTGCAGGTGCGCTACCTGTTTGACCTGTCGGGTGCCAGCCAGCACACGCTCCAGGCCCTCGCGGCGCGCACCGAATGGCGCCGCCACGAGCAGACCGCCGCGCGGCAGGCCCTTGCCGGCCAGATTGCCGCCACCGCCATCGCGCGGGCGCGCTGGGCGGCGCAGGTTGAGGCCACGCACACCCTCGCGCAGCAACAGCAGGCCCAGGCGGACATCGCCCAGGCGCGCTTGCGCCTGGGCCAGGCCACGCCCGACGAAGCCCTGGCACTGCAGGCCCAGGCTGCACAAACCCGTGCCAGCCTGCCTCCGCTGCGCCAGCAGATGCAGCAGGCCGAGCACGTGCTGGCCGTGCTGGCAGGCCAGCCCCCCGGCATGCAGCCCCTGCATGCTTTCGCGTTGGGCGACTTCACCCTGCCGGCGCAATTGCCGCTGCGTGTGCCCTCGCAGCTGGTACGCCAGCGGCCAGACATCCAGGCCAGCGAGGCGTTGTTGCACGCCGCCGACGCCGAGCACGGCGCCACCGTGGCACGACGCTACCCGCAGCTGCAGCTGAGCGCCAACCTGGGCAGCCAGGCCCTGACCAGTGGCGCTCTGTTTGGTGCGGGCGCGGCGGTGTGGGCGCTGGGCGGGCAACTGGCGCAGCCGTTTTTCAATCCGGCGCAGCAGGGCCAGGAGGCGGCGGCGCTGGCTGCGCTGCAAGCGGCCAGCGGCCAGTACCAGAGTGTGGTGCTGCAGGCATTGCGCCAGGTGGCCGACGCCCTGGGTGCCCTGGACCACGGCGCGCAGGCCCTGCAGTCCCTGCGCGAAGCCGATTCGGCAGCCGAGGGTTCGGCGCGCACCGTGCAGCGCCGCTACGCCCTGGGTGCGGCCAGCTACGTACAACTGGTGCAAGCCCAGCAGCAGGTGACGCAAACCGCCCTGCTGCTGGCCCAGGCCCAAGCGCAGCAGCTGGCCGACTGCGTGGCGTTGTACCAGGCCTTGGGCACGCCTTGA
PROTEIN sequence
Length: 491
MRPPAPAVSLPLGGAHVRILTMALGCLLAAWLTGCASSRQEAAPPAAVAPDDAPAPWSDGPRQRAATPPRVAGLALPGPWWESLQSPALSALIAQAQAASPTLAAAEAALRQAEALQNAQAAITAQPQFDATVGAQRQHTSPAALGQSGEGRSFSLYSAGLQVRYLFDLSGASQHTLQALAARTEWRRHEQTAARQALAGQIAATAIARARWAAQVEATHTLAQQQQAQADIAQARLRLGQATPDEALALQAQAAQTRASLPPLRQQMQQAEHVLAVLAGQPPGMQPLHAFALGDFTLPAQLPLRVPSQLVRQRPDIQASEALLHAADAEHGATVARRYPQLQLSANLGSQALTSGALFGAGAAVWALGGQLAQPFFNPAQQGQEAAALAALQAASGQYQSVVLQALRQVADALGALDHGAQALQSLREADSAAEGSARTVQRRYALGAASYVQLVQAQQQVTQTALLLAQAQAQQLADCVALYQALGTP*