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scnpilot_p_inoc_scaffold_8458_curated_15

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 13399..13950

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pseudomonas fuscovaginae RepID=UPI00037170C4 similarity UNIREF
DB: UNIREF100
  • Identity: 51.8
  • Coverage: 166.0
  • Bit_score: 152
  • Evalue 3.70e-34
RNA polymerase sigma 70 {ECO:0000313|EMBL:KIC83407.1}; TaxID=1586081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. C5pp.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 162.0
  • Bit_score: 148
  • Evalue 1.30e-32
RNA polymerase ECF-subfamily sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 162.0
  • Bit_score: 146
  • Evalue 8.30e-33

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Taxonomy

Pseudomonas sp. C5pp → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
GTGCCCTCCCTGTTCCTCGGTCCGACCCCGCCCCTGATGGCCACGCTCGTGCGCCACTACGAGGAACTCGTCGCCCACGTCTGGCGCGGCCCCGTGGCGCGCTGGTCCGATGCGGCCATGGCCCGCGAGGTGGTGCACGACGTGTGCGCCGAACTCATCGAGCGCCCGCCCGCCCCGCCACGCACGCCGCTGGCCTTCCTGCGCACCGTGTGCACGCGCCGCGCCATCGACCGCTGCCGGATCGAACAGCGCCACGCCCAATGGACCGGCAGCGCCGGGACCCTGCCCGACGTTGCCCTGCCCGACAGCCACGACCCCGCACGCATCCTGGAGGGCCGCCAGCGCCTGGCCCTGCTGGCCGACTGCATCCACGCCCTGCCGCCGCGCCGCCGCGACGTGTTCGTCATGCACCGCATTCACGGCATGGCGCAGCAGGACATCGCGCGGCACCTGGGCATTTCGCTCAAGACGGTGGAAAAGCACCTGGCGCTCGGCACCGCCGCCTGCCGCGGCGCGATGGACCAGGCCCTGCACGACCTGGCGGCGCCATGA
PROTEIN sequence
Length: 184
VPSLFLGPTPPLMATLVRHYEELVAHVWRGPVARWSDAAMAREVVHDVCAELIERPPAPPRTPLAFLRTVCTRRAIDRCRIEQRHAQWTGSAGTLPDVALPDSHDPARILEGRQRLALLADCIHALPPRRRDVFVMHRIHGMAQQDIARHLGISLKTVEKHLALGTAACRGAMDQALHDLAAP*