ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_p_inoc_scaffold_1998_curated_6

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 2628..2948

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000382CAD0 similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 105.0
  • Bit_score: 186
  • Evalue 1.00e-44
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 106.0
  • Bit_score: 185
  • Evalue 9.40e-45
Integrase catalytic region {ECO:0000313|EMBL:ADG32254.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 106.0
  • Bit_score: 185
  • Evalue 4.20e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiomonas intermedia → Thiomonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 321
TTGATCTTCCACAGCGACCGGGGCAGCCAGTACGCCAGCCACGACTTCCAGGACGTGCTCAAGGCGTACGGCATCACCAGTTCGATGAGCCGCAAAGCCAGCTGCTGGGACAACGCCTGCAGCGAGACGCTGTTCGGGTCATTGAAGGTGGAGCGGCTGCACGGCCAGCGCTTCAAGACCAGGCGCGAGGCGAAGGACGAAACCATAGCCTGGCTGCTCTGGTACAACCGTGCTCGATTGCACTCGACGCTGGCCTGCGTCAGCCCGATGCAGTTCGAGCAGGACTGGCTTGCCAATCAACCACGGCAAGCCAACTCATGA
PROTEIN sequence
Length: 107
LIFHSDRGSQYASHDFQDVLKAYGITSSMSRKASCWDNACSETLFGSLKVERLHGQRFKTRREAKDETIAWLLWYNRARLHSTLACVSPMQFEQDWLANQPRQANS*