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scnpilot_p_inoc_scaffold_1998_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1998_curated_1
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..832
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035D3AC3
Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:GAD23573.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
selenocysteine-specific translation elongation factor; K03833 selenocysteine-specific elongation factor
scnpilot_p_inoc_scaffold_1998_curated_2
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1161..1451)
DNA (291bp) protein (97aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB83241.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
scnpilot_p_inoc_scaffold_1998_curated_3
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1750..2076
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1D4_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG30930.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
scnpilot_p_inoc_scaffold_1998_curated_4
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2057..2344
DNA (288bp) protein (96aa)
Transcriptional regulator, XRE family n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1D5_THIK1
XRE family transcriptional regulator; K07726 putative transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ADG30931.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
scnpilot_p_inoc_scaffold_1998_curated_5
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2449..2631
DNA (183bp) protein (61aa)
Transposase IS3/IS911 family protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WRG7_VEREI
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ABM60224.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
scnpilot_p_inoc_scaffold_1998_curated_6
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2628..2948
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000382CAD0
integrase catalytic subunit
Integrase catalytic region {ECO:0000313|EMBL:ADG32254.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
scnpilot_p_inoc_scaffold_1998_curated_7
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3022..3612)
DNA (591bp) protein (197aa)
Transcriptional regulator, PadR-like family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BLW3_DELAS
PadR-like family transcriptional regulator
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:EZP55441.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
scnpilot_p_inoc_scaffold_1998_curated_8
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3780..4763
DNA (984bp) protein (328aa)
transmembrane protein; K00459 nitronate monooxygenase [EC:1.13.12.16]
2-nitropropane dioxygenase n=1 Tax=Caldimonas manganoxidans RepID=UPI0003783ABF
2-nitropropane dioxygenase {ECO:0000313|EMBL:EXU78684.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
scnpilot_p_inoc_scaffold_1998_curated_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4778..6646
DNA (1869bp) protein (623aa)
putative Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II (EC:6.2.1.26); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6U3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38302.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
scnpilot_p_inoc_scaffold_1998_curated_10
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6660..7808
DNA (1149bp) protein (383aa)
acyl-CoA dehydrogenase domain-containing protein; K11731 citronellyl-CoA dehydrogenase [EC:1.3.99.-]
Acyl-CoA dehydrogenase domain protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QEM8_RHOPT
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:GAN78066.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
scnpilot_p_inoc_scaffold_1998_curated_11
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8609..9382)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5NB28_9BURK
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_p_inoc_scaffold_1998_curated_12
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9386..10672)
DNA (1287bp) protein (429aa)
ATPase-like protein n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5NAW1_9BURK
ATPase-like protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_p_inoc_scaffold_1998_curated_13
unknown

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comp(10798..10956)
DNA (159bp) protein (53aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1998_curated_14
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11250..12305)
DNA (1056bp) protein (352aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
segregation protein A n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003651E2D
selenide, water dikinase-like
scnpilot_p_inoc_scaffold_1998_curated_15
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12308..13399)
DNA (1092bp) protein (364aa)
ATP-binding protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000378BED7
protein mrp-like
ATPases involved in chromosome partitioning {ECO:0000313|EMBL:GAD23576.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_p_inoc_scaffold_1998_curated_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13609..14838
DNA (1230bp) protein (410aa)
Patatin n=1 Tax=Acidovorax sp. KKS102 RepID=K0IDR3_9BURK
uncharacterized LOC100488822
Patatin {ECO:0000313|EMBL:AFU47476.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_1998_curated_17
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14975..17245
DNA (2271bp) protein (757aa)
Putative TonB-dependent receptor protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K862_AZOSB
putative TonB-dependent receptor protein
Putative TonB-dependent receptor protein {ECO:0000313|EMBL:CAL95017.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
scnpilot_p_inoc_scaffold_1998_curated_18
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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17413..17964
DNA (552bp) protein (184aa)
Conserved hypothetical secreted protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K863_AZOSB
hypothetical protein
Conserved hypothetical secreted protein {ECO:0000313|EMBL:CAL95018.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
scnpilot_p_inoc_scaffold_1998_curated_19
unknown

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17961..18056
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 19 items

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