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scnpilot_p_inoc_scaffold_1158_curated_9

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 4098..4721

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002E105FC similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 207.0
  • Bit_score: 385
  • Evalue 3.80e-104
30S ribosomal protein S4-like similarity KEGG
DB: KEGG
  • Identity: 96.6
  • Coverage: 207.0
  • Bit_score: 396
  • Evalue 4.00e-108
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 207.0
  • Bit_score: 378
  • Evalue 8.50e-102

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Taxonomy

Comamonas aquatica → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
GTGGCACGTTATCTCGGCCCCAAGGCCAAACTCTCCCGCCGTGAAGGCACCGACCTGTTCCTGAAGAGCGCTCGCCGCTCGATCGCGGACAAGGCCAAGTTCGACTCCAAGCCCGGCCAGCATGGCCGTACTTCTGGCCAGCGCACGTCCGACTACGGCCTGCAGCTGCGCGAGAAGCAGAAGGTCAAGCGCATGTACGGCGTGATGGAAAAGCAGTTCCGCCGCTACTTCGCCGAGGCTGACCGCCGCAAGGGCAACACCGGCGCCAACCTGCTGGCCTTGCTGGAGTGCCGCCTGGACAACGTGGTGTACCGCATGGGCTTCGGCTCCACCCGCGCCGAAGCGCGCCAGCTGGTGTCGCACAAGGCCATTCTGGTAAACGGCCAGGCTGTGAACATCCCCTCGTTCCTGATCAAGGCTGGCGATGTCGTGACCGTGCGCGAGAAGTCGAAGAAGCAGGGCCGTGTCGTCGAAGCGCTGCAACTGGCGCAGCAAGTGGGTTTCCCCGCATGGGTCGAAGTGGCCGCCGACAAGGCCGAAGGTACCTTCAAGAAGGTGCCGGATCGCGACGAGTTCGGTGCCGACATCAACGAATCGCTGATCGTTGAGTTGTACTCGCGTTAA
PROTEIN sequence
Length: 208
VARYLGPKAKLSRREGTDLFLKSARRSIADKAKFDSKPGQHGRTSGQRTSDYGLQLREKQKVKRMYGVMEKQFRRYFAEADRRKGNTGANLLALLECRLDNVVYRMGFGSTRAEARQLVSHKAILVNGQAVNIPSFLIKAGDVVTVREKSKKQGRVVEALQLAQQVGFPAWVEVAADKAEGTFKKVPDRDEFGADINESLIVELYSR*