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scnpilot_p_inoc_scaffold_4054_curated_6

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(4506..4739)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L28 n=9 Tax=Comamonadaceae RepID=RL28_ACIET similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 77.0
  • Bit_score: 158
  • Evalue 2.80e-36
ribosomal protein l28; K02902 large subunit ribosomal protein L28 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 77.0
  • Bit_score: 158
  • Evalue 8.90e-37
50S ribosomal protein L28 {ECO:0000255|HAMAP-Rule:MF_00373}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 77.0
  • Bit_score: 158
  • Evalue 4.00e-36

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Taxonomy

Acidovorax sp. JS42 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 234
ATGGCACGCGTATGTGAAGTAACGGGCAAGAAGCCCATGGTGGGAAACAACGTCTCCCACGCCAACAACAAGACCAAGCGCCGTTTCCTGCCCAACCTGCAGTACCGTCGTTTCTGGGTGGAAAGCGAGAACCGCTGGGTGCGCCTGCGCGTTTCCAGCGCTGCCCTGCGTCTGATCGACAAGAACGGCATCGACTCCGTGCTCGCAGACATGCGCGCCCGTGGCCAGGCTTAA
PROTEIN sequence
Length: 78
MARVCEVTGKKPMVGNNVSHANNKTKRRFLPNLQYRRFWVESENRWVRLRVSSAALRLIDKNGIDSVLADMRARGQA*