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scnpilot_p_inoc_scaffold_1406_curated_8

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(9714..10199)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034915B8 similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 161.0
  • Bit_score: 156
  • Evalue 2.20e-35
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ELS26606.1}; TaxID=1149133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes KF707.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.3
  • Coverage: 139.0
  • Bit_score: 153
  • Evalue 2.70e-34
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.9
  • Coverage: 160.0
  • Bit_score: 133
  • Evalue 8.30e-29

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Taxonomy

Pseudomonas pseudoalcaligenes → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 486
ATGGCAAATAAAGTTGACAATATCAACCAACTGGTTTCCCCGGGAAGCGCCCCGGCGCGCGCGGCGGGCGATGAGGTGATGGAGCTGCTGCACCGGCTGATGCACCAGTACCGCGCGCTGCAGCAGCAGGCGCTGCGCGAGGGCGCGCACGGCATCACGCTCTGGGAGAGCAAGGCGCTGGGTTTCTTCGCCCGCCAGCCCGGGGCGACGCAAAGCGACCTGGCGGCCCACTCGGGGCGCGACAAGGCGCAACTGGCGCGCCTGGTGAAAGGGCTGCGCGAGCGCGGCCTGCTCGATGGCGTGGCCGACGCCGCCGACCGCCGTACCGTGCGCATCGCCCCCACGGCGCAGGGGCTGGCGCTGCTGCAGTCCCTGCGCGGCCAGGCGCAGCAGGTGGCCGAGCGCGCCGTGGCCGGGCTGGACGGGCAGGAGCAGGCGCAACTGCGCGCGCTGCTGGCGCGCATGGCGGCCAACCTGGAGGGGTGA
PROTEIN sequence
Length: 162
MANKVDNINQLVSPGSAPARAAGDEVMELLHRLMHQYRALQQQALREGAHGITLWESKALGFFARQPGATQSDLAAHSGRDKAQLARLVKGLRERGLLDGVADAADRRTVRIAPTAQGLALLQSLRGQAQQVAERAVAGLDGQEQAQLRALLARMAANLEG*