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scnpilot_p_inoc_scaffold_1406_curated

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1406_curated_1
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..102)
DNA (102bp) protein (34aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UW34_VARPE
ATP-dependent Clp protease ATP-binding subunit clpX-like
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000255|HAMAP-Rule:MF_00175}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
scnpilot_p_inoc_scaffold_1406_curated_2
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(200..808)
DNA (609bp) protein (203aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
Clp protease proteolytic subunit ClpP n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002375E00
ATP-dependent Clp protease, proteolytic subunit ClpP
scnpilot_p_inoc_scaffold_1406_curated_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(946..2259)
DNA (1314bp) protein (438aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Trigger factor n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GEQ5_ALIDK
Trigger factor; K03545 trigger factor
scnpilot_p_inoc_scaffold_1406_curated_4
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2505..5699)
DNA (3195bp) protein (1065aa)
Acriflavin resistance protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C1L4_9BURK
Acriflavin resistance protein {ECO:0000313|EMBL:EHL21577.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
acriflavin resistance protein
scnpilot_p_inoc_scaffold_1406_curated_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5707..6921)
DNA (1215bp) protein (405aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TWS7_ALIDB
efflux transporter, rnd family, mfp subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADV00717.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_p_inoc_scaffold_1406_curated_6
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7026..7922
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000368AC08
Phytoene/squalene synthetase {ECO:0000313|EMBL:GAD24822.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
squalene synthase hpnc
scnpilot_p_inoc_scaffold_1406_curated_7
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8043..9545
DNA (1503bp) protein (501aa)
serine dehydratase n=1 Tax=Acidovorax radicis RepID=UPI00023769B5
L-serine dehydratase 1
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_1406_curated_8
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9714..10199)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034915B8
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ELS26606.1}; TaxID=1149133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes KF707.;"
MarR family transcriptional regulator
scnpilot_p_inoc_scaffold_1406_curated_9
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10234..10983
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI000367BC85
siderophore-interacting protein
Tax=BJP_08E140C01_Burkholderiales_65_30
scnpilot_p_inoc_scaffold_1406_curated_10
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11104..13281)
DNA (2178bp) protein (726aa)
TonB-dependent siderophore receptor n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WVU8_COMTE
TonB-dependent siderophore receptor {ECO:0000313|EMBL:EED67720.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
ferric anguibactin receptor 2; K02014 iron complex outermembrane recepter protein
scnpilot_p_inoc_scaffold_1406_curated_11
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13334..14209)
DNA (876bp) protein (292aa)
Ferric vibrioferrin-binding periplasmicprotein PvuB n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0J504_COMT2
Ferric anguibactin-binding protein {ECO:0000313|EMBL:KGG90811.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
ferric vibrioferrin-binding periplasmic protein PvuB; K02016 iron complex transport system substrate-binding protein
scnpilot_p_inoc_scaffold_1406_curated_12
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14254..15024)
DNA (771bp) protein (257aa)
Iron(3+)-hydroxamate import ATP-binding protein FhuC {ECO:0000313|EMBL:CKG99920.1}; EC=3.6.3.34 {ECO:0000313|EMBL:CKG99920.1};; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
BauE protein n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5UED1_ALCXX
ferric siderophore ABC transporter, ATP-binding protein
scnpilot_p_inoc_scaffold_1406_curated_13
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15021..15968)
DNA (948bp) protein (316aa)
UPI0003D5D429 related cluster n=1 Tax=unknown RepID=UPI0003D5D429
Ferric siderophore ABC transporter, permease protein {ECO:0000313|EMBL:AHC45737.1}; TaxID=1216976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans NBRC 15126 = ATCC 27061.;"
ferric siderophore ABC transporter, permease protein
scnpilot_p_inoc_scaffold_1406_curated_14
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15968..16897)
DNA (930bp) protein (310aa)
UPI0003D655A3 related cluster n=1 Tax=unknown RepID=UPI0003D655A3
Iron-uptake system permease protein FeuB {ECO:0000313|EMBL:CKG99959.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
Iron transport protein
scnpilot_p_inoc_scaffold_1406_curated_15
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16897..18603)
DNA (1707bp) protein (569aa)
ABC transporter transmembrane region family protein 4 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HWE7_ACHXA
ABC transporter transmembrane region family protein 4; K06147 ATP-binding cassette, subfamily B, bacterial
ABC transporter transmembrane region family protein 4 {ECO:0000313|EMBL:ADP18760.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
scnpilot_p_inoc_scaffold_1406_curated_16
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18597..20363)
DNA (1767bp) protein (589aa)
ABC transporter family protein 84 {ECO:0000313|EMBL:ADP18761.1}; EC=3.6.3.- {ECO:0000313|EMBL:ADP18761.1};; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
ABC transporter family protein 84 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HWE8_ACHXA
uncharacterized ABC transporter ATP-binding protein Mb1383-like
scnpilot_p_inoc_scaffold_1406_curated_17
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20488..21108
DNA (621bp) protein (207aa)
Putative transcriptional regulator, TetR family n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=R4XJH0_ALCXX
putative transcriptional regulator, TetR family
Putative transcriptional regulator, TetR family {ECO:0000313|EMBL:CCH04739.1}; TaxID=1167634 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans NH44784-1996.;"
scnpilot_p_inoc_scaffold_1406_curated_18
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21224..22066
DNA (843bp) protein (281aa)
squalene synthase hpnd; K02291 phytoene synthase [EC:2.5.1.32]
Squalene synthase HpnD n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MG07_ACIET
Squalene synthase HpnD {ECO:0000313|EMBL:ACM32598.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_p_inoc_scaffold_1406_curated_19
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22069..23364
DNA (1296bp) protein (432aa)
Squalene-associated fad-dependent desaturase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C1M2_9BURK
Squalene-associated fad-dependent desaturase {ECO:0000313|EMBL:EHL21585.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
amine oxidase
scnpilot_p_inoc_scaffold_1406_curated_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23410..24123
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI00030BAE40
Uncharacterized protein {ECO:0000313|EMBL:EPD40513.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1406_curated_21
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24193..24405)
DNA (213bp) protein (71aa)
hypothetical protein id=12549718 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1406_curated_22
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24402..25223)
DNA (822bp) protein (274aa)
Putative integral membrane protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EAV1_9BURK
Putative integral membrane protein {ECO:0000313|EMBL:EJE49531.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
integral membrane protein
scnpilot_p_inoc_scaffold_1406_curated_23
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25333..26433
DNA (1101bp) protein (367aa)
ferrochelatase id=12549710 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ferrochelatase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1406_curated_24
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26430..28838
DNA (2409bp) protein (803aa)
Putative ATP-dependent protease La, putative n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MAD7_ACIET
ATP-dependent protease la
Putative ATP-dependent protease La, putative {ECO:0000313|EMBL:ACM33509.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_p_inoc_scaffold_1406_curated_25
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28849..29730)
DNA (882bp) protein (294aa)
hydrolase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003783F1F
Predicted hydrolases or acyltransferase {ECO:0000313|EMBL:GAD21323.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
alpha/beta fold family hydrolase
scnpilot_p_inoc_scaffold_1406_curated_26
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29775..31961)
DNA (2187bp) protein (729aa)
Hydroxybutyrate-dimer hydrolase {ECO:0000313|EMBL:AEB84487.1}; EC=3.1.1.22 {ECO:0000313|EMBL:AEB84487.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
hydroxybutyrate-dimer hydrolase (EC:3.1.1.22); K07518 hydroxybutyrate-dimer hydrolase [EC:3.1.1.22]
Hydroxybutyrate-dimer hydrolase n=2 Tax=Alicycliphilus denitrificans RepID=E8TY73_ALIDB
scnpilot_p_inoc_scaffold_1406_curated_27
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32007..33074)
DNA (1068bp) protein (356aa)
ABC transporter permease n=1 Tax=Acidovorax radicis RepID=UPI0002376621
Inner-membrane translocator {ECO:0000313|EMBL:EER58542.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
inner-membrane translocator
scnpilot_p_inoc_scaffold_1406_curated_28
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33092..34075)
DNA (984bp) protein (328aa)
Inner-membrane translocator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1Z9_9BURK
inner-membrane translocator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_1406_curated_29
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34161..34883)
DNA (723bp) protein (241aa)
ABC transporter n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVQ8_9BURK
ribose import ATP-binding protein RbsA-like
ABC transporter {ECO:0000313|EMBL:AFU46973.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_1406_curated_30
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34880..35656)
DNA (777bp) protein (259aa)
ABC transporter related protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TAF6_ACIDE
ABC transporter related protein {ECO:0000313|EMBL:EER58545.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
ABC transporter-like protein
Displaying items 1-30 of 31 in total

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