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scnpilot_p_inoc_scaffold_4604_curated_20

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 17987..18292

Top 3 Functional Annotations

Value Algorithm Source
swib/mdm2 domain-containing protein id=12553286 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 85.8
  • Coverage: 106.0
  • Bit_score: 170
  • Evalue 7.20e-40
SWIB/MDM2 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 85.1
  • Coverage: 101.0
  • Bit_score: 168
  • Evalue 8.60e-40
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 106.0
  • Bit_score: 170
  • Evalue 1.00e-39

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Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 306
ATGGCAACTGCTGCAAAGAAGGCCACCGCACCCAAGACCGAAGCCGCCGCTAAAAAGCGCACCCCCAACGCGGCCTTCATGAAACCCCTGACGCCCAGCCCTGCGCTGGCTGCCGTCGTGGGTGCCAAGCCGCTGCCGCGCACCGAGATCATCAGCAAGCTGTGGGCCTACATCAAGGAACACAACCTGCAAGACCCCGCCAACAAGCGCATGATCAACGCCGACGCAAAGCTCAAGGACGTGTTCGGCAAGCCCCAGGTGTCGATGTTCGAGATGGCTGGCCTGATCGGCAAGCATGTGAAGTAA
PROTEIN sequence
Length: 102
MATAAKKATAPKTEAAAKKRTPNAAFMKPLTPSPALAAVVGAKPLPRTEIISKLWAYIKEHNLQDPANKRMINADAKLKDVFGKPQVSMFEMAGLIGKHVK*