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scnpilot_p_inoc_scaffold_1100_curated_10

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 8538..9563

Top 3 Functional Annotations

Value Algorithm Source
Anti-FecI sigma factor, FecR n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AUP0_DELSC similarity UNIREF
DB: UNIREF100
  • Identity: 57.8
  • Coverage: 351.0
  • Bit_score: 388
  • Evalue 7.40e-105
anti-FecI sigma factor FecR; K07165 transmembrane sensor similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 351.0
  • Bit_score: 388
  • Evalue 2.30e-105
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:AEF87978.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 351.0
  • Bit_score: 388
  • Evalue 1.00e-104

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Taxonomy

Delftia sp. Cs1-4 → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1026
ATGATGAAGCCCCTCCCCACGGGCCAGACCCCGGAATCCATCCTGGCACTGCACGAAACCGCCGCCGACTGGCACATCCGCCGCCAGCAGACGGACTGGAGCAGCGCCGACGAACGCGCGATGAACGCCTGGCTCGACGCCGACCCCCTGCACCGCGAGATCATGGACGGCCTTGCCAGCACCTGGCTGCACGCCGAACAGCTCAAGACCTACCGGCCCCAGGTCTATGGCCGCCAGCCTGCCGACGCCGCGCCGCCATCGGCGCGCCCGGCGGCCCCCGCGCCACGGGCGCCCCAGCGCCGCCGGTGGCTCGTGCCCGCCCTGATCGCAGCCTGCGCCGTGATCGCCACCGGCGGCTGGTACCGCTGGGACACCACCGCCAGCTACACCCTCGACGTGACCACCGGCGCGGGCGAAACCCGCGAACTCGATCTGCCCGACGGCACGCGCATCGCGCTCAACATCGACAGCACGCTCCAGGTGCGCTACTACCCGCGCCGCCGCGAAACCGTGCTGGACCGGGGCGAAGCCTTCTTCCGCGTCGCGGCGGACGGCGCCAGGCCCTTTACCGTGGACAGCGGCGCCAGCCAGGTGCGCGTGGTTGGCACCGCCTTCAACGTGCGCGCCGCGCCGCCCCGGCTCGTTGTCAAGGTCAGCGAAGGCCGCGTGGAAGTGCGGCCCGGCCGCACCGCGCCCCCCGTGCTGGTCCTGGGGCCGGGCGCGGGCGTCGGCATCGACCCGGCCACCGGCAGCCACCAGAGCCTGCCCGTGGCCGCCGAAGACGTGGGCGACTGGCGCAGCGGGCAAATCCATTTCAGCCGCACGCCCCTGGCGGACGTGGCGCAGGAACTGTCCCGCTACCTGGGCAAACCTGTCACCGTGGCGGATGACCACCTGGCCGCCGTGCCGGTCTCCGGCTTCCTGGCCGTGCAGGCCCCCGAGAACTTCATCCGCTCCCTGCCCGACGTGGCGCCCGTGCGCGTGCAGCGCGAGCCGGACGGCGGCTGGCGTATCTCGGTGCACTGA
PROTEIN sequence
Length: 342
MMKPLPTGQTPESILALHETAADWHIRRQQTDWSSADERAMNAWLDADPLHREIMDGLASTWLHAEQLKTYRPQVYGRQPADAAPPSARPAAPAPRAPQRRRWLVPALIAACAVIATGGWYRWDTTASYTLDVTTGAGETRELDLPDGTRIALNIDSTLQVRYYPRRRETVLDRGEAFFRVAADGARPFTVDSGASQVRVVGTAFNVRAAPPRLVVKVSEGRVEVRPGRTAPPVLVLGPGAGVGIDPATGSHQSLPVAAEDVGDWRSGQIHFSRTPLADVAQELSRYLGKPVTVADDHLAAVPVSGFLAVQAPENFIRSLPDVAPVRVQREPDGGWRISVH*