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scnpilot_p_inoc_scaffold_5622_curated_10

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 8649..8906

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 86.0
  • Bit_score: 186
  • Evalue 4.40e-45
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=688245 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (strain CNB-2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 86.0
  • Bit_score: 186
  • Evalue 2.00e-44
DNA-directed RNA polymerase subunit beta' n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AN21_DELSC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 86.0
  • Bit_score: 186
  • Evalue 1.40e-44

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Taxonomy

Comamonas testosteroni → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 258
ATGAAATCGCTACTCGACCTGTTCAAGCAATTCACACCCGATGAGCATTTCGATGCCATCAAGATCGGCCTGGCATCGCCCGAGAAGATCCGTTCCTGGTCCTTCGGCGAGGTGAAGAAGCCCGAGACCATCAACTACCGCACGTTCAAGCCCGAGCGCGACGGCCTGTTCTGCGCCAAGATCTTCGGCCCCATCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTGATCTGCGAG
PROTEIN sequence
Length: 86
MKSLLDLFKQFTPDEHFDAIKIGLASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAKIFGPIKDYECLCGKYKRLKHRGVICE