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scnpilot_p_inoc_scaffold_4342_curated_11

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 7535..8344

Top 3 Functional Annotations

Value Algorithm Source
RNA-directed DNA polymerase n=1 Tax=Acidovorax radicis RepID=UPI0002377C8D similarity UNIREF
DB: UNIREF100
  • Identity: 57.9
  • Coverage: 280.0
  • Bit_score: 300
  • Evalue 2.10e-78
Reverse transcriptase (RNA-dependent DNA polymerase) {ECO:0000313|EMBL:EJE55016.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 282.0
  • Bit_score: 287
  • Evalue 2.60e-74
RNA-directed DNA polymerase similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 119.0
  • Bit_score: 94
  • Evalue 7.20e-17

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Taxonomy

Acidovorax sp. CF316 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 810
ATGCATGTCCATGTTCATGCCCGCGTGCTGGCCAAGGCCATCGCCCTGGCCGTACTGGCCGACGCCCAGGCACCGCAGCGCCGCACCGTCGAGGCCCTGCGCGCGCGGGTGCAGGTCTGCCTGGGCCACGCCCCGGGCGAGGAACAGCGCCCGCTCCCGGCACCACTGCAAGAACAGCTGCGCCGCCTGGCCACGCTGCCCACGCGCGAATGGGCGCGGCTGGGGGCGGAAGACATCGGCACCTGGTTGCGCGAGGGTTTCTGGCGCCGCATGGCCGGTGTGCGCACCGGCGCGCCCTCTGCCCGTGGTGCGCGGGTGCCTGACGATGGTTTCGACGAAGAAGACAACGACACCGATGACGACGGCATGCCCGCCGCCCCGCCCCGCCAATGGACGGCGAGGGCATTGGCCGAAGCGTTCCGCCAATGGGCCTCGCATGTCACCCCCAAACGCTGGCTGCTGCGCTCCGCAACCACTGGCCCGCTGCCCGCATGGCGCGATAGCGATGGCGCCCGCGCCGGGCCACTGCTTGCGACCGCTGCCGATCTCGCCGGAGCCTTGGCCATTTCGCTCGAAGACCTGCTGTGGCTCGCGCCGGAACACGCCCATTGGCGCGAGCGGCAGCCGGACGGCGGCCACGCCATGGCGCCGTCGCACTACCGCTACCGGCTGCTGCCCAAGCCCAGTGGCGGCTTGCGCCTGCTGGAAGCGCCGCGCCCACGGCTGGCGCAGGCGCAGCGGCGGATTCTCGATCTGCTGCTGGCCCCAATTCCCGTGCACGAGGCAGCGCATGGCTTCGTGCGCGGATGC
PROTEIN sequence
Length: 270
MHVHVHARVLAKAIALAVLADAQAPQRRTVEALRARVQVCLGHAPGEEQRPLPAPLQEQLRRLATLPTREWARLGAEDIGTWLREGFWRRMAGVRTGAPSARGARVPDDGFDEEDNDTDDDGMPAAPPRQWTARALAEAFRQWASHVTPKRWLLRSATTGPLPAWRDSDGARAGPLLATAADLAGALAISLEDLLWLAPEHAHWRERQPDGGHAMAPSHYRYRLLPKPSGGLRLLEAPRPRLAQAQRRILDLLLAPIPVHEAAHGFVRGC