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scnpilot_p_inoc_scaffold_4342_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_4342_curated_1
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..127)
DNA (126bp) protein (42aa)
ABC transporter permease n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037BE8E7
ABC transporter permease; K01997 branched-chain amino acid transport system permease protein; K01998 branched-chain amino acid transport system permease protein
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEB82644.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_p_inoc_scaffold_4342_curated_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(135..1334)
DNA (1200bp) protein (400aa)
ABC transporter substrate-binding protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000367CEB3
Extracellular ligand-binding receptor {ECO:0000313|EMBL:GAD20547.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
scnpilot_p_inoc_scaffold_4342_curated_3
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1554..2327
DNA (774bp) protein (258aa)
oxidoreductase FAD-binding subunit; K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2]
ferredoxin--NADP reductase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037B09F2
Flavodoxin reductases (Ferredoxin-NADPH reductases) family 1 {ECO:0000313|EMBL:GAD20548.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_p_inoc_scaffold_4342_curated_4
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2368..4161)
DNA (1794bp) protein (598aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Acidovorax sp. CF316 RepID=J0UFW4_9BURK
phosphoenolpyruvate-protein phosphotransferase-like
scnpilot_p_inoc_scaffold_4342_curated_5
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4178..4447)
DNA (270bp) protein (90aa)
phosphocarrier protein HPr n=1 Tax=Curvibacter lanceolatus RepID=UPI000369059D
PTS system phosphocarrier protein HPr
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
scnpilot_p_inoc_scaffold_4342_curated_6
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4440..4874)
DNA (435bp) protein (145aa)
pts system fructose subfamily iia component; K02821 PTS system, ascorbate-specific IIA component [EC:2.7.1.69]
PTS system fructose subfamily IIA component n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TVJ2_ALIDB
Pts system fructose subfamily iia component {ECO:0000313|EMBL:GAO26109.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_4342_curated_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4985..5488
DNA (504bp) protein (168aa)
Redoxin domain protein n=2 Tax=cellular organisms RepID=A9BPT2_DELAS
thiol-disulfide oxidoreductase resA-like
Redoxin domain protein {ECO:0000313|EMBL:ABX33051.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_p_inoc_scaffold_4342_curated_8
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5585..6031)
DNA (447bp) protein (149aa)
cytochrome C n=1 Tax=Acidovorax radicis RepID=UPI0002377C90
class II cytochrome c
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_4342_curated_9
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6142..6810
DNA (669bp) protein (223aa)
Cytochrome b n=1 Tax=Acidovorax sp. CF316 RepID=J1ESB6_9BURK
Cytochrome b {ECO:0000313|EMBL:EJE55014.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
cytochrome B561
scnpilot_p_inoc_scaffold_4342_curated_10
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6865..7359
DNA (495bp) protein (165aa)
GCN5 family acetyltransferase n=1 Tax=Acidovorax radicis RepID=UPI0002377C8E
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EER59987.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
GCN5-like N-acetyltransferase
scnpilot_p_inoc_scaffold_4342_curated_11
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7535..8344
DNA (810bp) protein (270aa)
RNA-directed DNA polymerase n=1 Tax=Acidovorax radicis RepID=UPI0002377C8D
Reverse transcriptase (RNA-dependent DNA polymerase) {ECO:0000313|EMBL:EJE55016.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
RNA-directed DNA polymerase
Displaying 11 items

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