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scnpilot_p_inoc_scaffold_1878_curated_1

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 2..775

Top 3 Functional Annotations

Value Algorithm Source
general secretory pathway protein E; K02454 general secretion pathway protein E similarity KEGG
DB: KEGG
  • Identity: 90.7
  • Coverage: 257.0
  • Bit_score: 462
  • Evalue 9.60e-128
general secretory pathway protein E; K02454 general secretion pathway protein E id=12549597 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 258.0
  • Bit_score: 462
  • Evalue 2.30e-127
Type II secretion system protein E (GspE) {ECO:0000313|EMBL:ABM34701.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 257.0
  • Bit_score: 462
  • Evalue 4.30e-127

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Taxonomy

Acidovorax citrulli → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 774
CTGTCGCGGCCCCATGGCATCTTGCTGGTCACGGGGCCCACGGGTTCGGGCAAGACCACCACGCTGTACGCGGCCCTGTCCAAGATCGACGCGCAGGCGAACAAGATCATCACGGTCGAGGACCCGGTCGAGTACCAGCTGGAGGGCATCAACCAGATCCAGGTGCACCCGCAAATCAACCTGACCTTTGCCAACGCCCTGCGTTCCATCCTGCGGCAGGATCCTGACATCATCATGATCGGTGAAATGCGCGATGGGGAAACCGCGCAAATCGCGGTGCAATCCGCACTGACCGGCCACTTGGTGCTCTCCACCTTGCACACCAACACGGCGGCTGGCGCGGTCATCCGCATGCAGGACATGGGGGTGGAAAGCTACCTCATCACCTCTTCGGTGAATGGCGTGCTCGCGCAGCGCCTTGTGCGCACCTTGTGCGGCCACTGCAAGGAAGCGTACGAACCTGGGCCGGAGCTGCGCGTCAGCACGGGCCTGGCAAGGTTTTGTCCGCCAGGCCAGCGCATCTACCGCGCCGTGGGCTGCGAGCATTGCCGCCAGTCAGGCTACCGGGGGCGCACGGGGATCCATGAGCTTTTCGTGCTGGACGAGCCCATGCGCCGCGCCATCATCGACGGGCGCGATGCCAACGCGCTCAACACCCTGGCGGCCCAGGGCGGCATGCTGAGCCTGTTCGAGGATGGTTTGCGCAAGGTGGCCGCGGGCGTGACCACGCTCGACGAATTGGCGCGTGTGACGCAGGACCAGTCCGATGCCTGA
PROTEIN sequence
Length: 258
LSRPHGILLVTGPTGSGKTTTLYAALSKIDAQANKIITVEDPVEYQLEGINQIQVHPQINLTFANALRSILRQDPDIIMIGEMRDGETAQIAVQSALTGHLVLSTLHTNTAAGAVIRMQDMGVESYLITSSVNGVLAQRLVRTLCGHCKEAYEPGPELRVSTGLARFCPPGQRIYRAVGCEHCRQSGYRGRTGIHELFVLDEPMRRAIIDGRDANALNTLAAQGGMLSLFEDGLRKVAAGVTTLDELARVTQDQSDA*