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scnpilot_p_inoc_scaffold_1878_curated

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1878_curated_1
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..775
DNA (774bp) protein (258aa)
general secretory pathway protein E; K02454 general secretion pathway protein E
general secretory pathway protein E; K02454 general secretion pathway protein E id=12549597 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Type II secretion system protein E (GspE) {ECO:0000313|EMBL:ABM34701.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scnpilot_p_inoc_scaffold_1878_curated_2
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

768..2018
DNA (1251bp) protein (417aa)
Type II secretion system protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1D4_ACIDE
Type II secretion system protein {ECO:0000313|EMBL:EER61692.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
type II secretion system F domain-containing protein; K02455 general secretion pathway protein F
scnpilot_p_inoc_scaffold_1878_curated_3
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2047..2484
DNA (438bp) protein (146aa)
General secretion pathway protein G n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q488_ACIAP
general secretion pathway protein G; K02456 general secretion pathway protein G
General secretion pathway protein G {ECO:0000313|EMBL:ADX47918.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scnpilot_p_inoc_scaffold_1878_curated_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2513..2959
DNA (447bp) protein (149aa)
General secretion pathway protein H n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WFR0_VEREI
general secretion pathway protein H; K02457 general secretion pathway protein H
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1878_curated_5
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3031..3372
DNA (342bp) protein (114aa)
General secretion pathway protein I n=1 Tax=Acidovorax sp. NO-1 RepID=H0BSZ2_9BURK
General secretion pathway protein I {ECO:0000313|EMBL:EHL24486.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
general secretion pathway protein I; K02458 general secretion pathway protein I
scnpilot_p_inoc_scaffold_1878_curated_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3372..4055
DNA (684bp) protein (228aa)
General secretion pathway protein J n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1D6_ACIDE
general secretion pathway protein J; K02459 general secretion pathway protein J
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1878_curated_7
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4055..4912
DNA (858bp) protein (286aa)
General secretory pathway protein K n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1D7_ACIDE
General secretory pathway protein K {ECO:0000313|EMBL:EER61695.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
general secretory pathway protein K; K02460 general secretion pathway protein K
scnpilot_p_inoc_scaffold_1878_curated_8
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4919..6124
DNA (1206bp) protein (402aa)
Fimbrial assembly family protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1D8_ACIDE
fimbrial assembly family protein; K02461 general secretion pathway protein L
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1878_curated_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6133..6684
DNA (552bp) protein (184aa)
general secretion pathway protein M n=1 Tax=Comamonas sp. B-9 RepID=UPI000395B638
general secretion pathway protein M; K02462 general secretion pathway protein M
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1878_curated_10
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6681..7328
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1E0_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER61698.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1878_curated_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7367..9721
DNA (2355bp) protein (785aa)
general secretion pathway protein D; K02453 general secretion pathway protein D id=12549587 bin=BDI species=Verminephrobacter eiseniae genus=Verminephrobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
general secretion pathway protein D; K02453 general secretion pathway protein D
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1878_curated_12
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9788..10168
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WFQ2_VEREI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM56459.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
scnpilot_p_inoc_scaffold_1878_curated_13
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10182..11084)
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q474_ACIAP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADX47904.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scnpilot_p_inoc_scaffold_1878_curated_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11170..12411)
DNA (1242bp) protein (414aa)
ABC transporter n=1 Tax=Chryseobacterium taeanense RepID=UPI00031837DD
ABC transporter family protein {ECO:0000313|EMBL:KFJ11457.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
ABC transporter-like protein; K09691 lipopolysaccharide transport system ATP-binding protein
scnpilot_p_inoc_scaffold_1878_curated_15
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12418..13218)
DNA (801bp) protein (267aa)
ABC transporter; K09690 lipopolysaccharide transport system permease protein id=12549582 bin=BDI species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ABC-2 type transporter; K09690 lipopolysaccharide transport system permease protein
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scnpilot_p_inoc_scaffold_1878_curated_16
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13273..14223)
DNA (951bp) protein (317aa)
PpiC-type peptidyl-prolyl cis-trans isomerase; K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; Flags: Precursor;; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q477_ACIAP
scnpilot_p_inoc_scaffold_1878_curated_17
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14379..15947)
DNA (1569bp) protein (523aa)
Putative uncharacterized protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TUQ1_ACIAC
uncharacterized LOC100486617
Uncharacterized protein {ECO:0000313|EMBL:ABM34689.1}; Flags: Precursor;; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scnpilot_p_inoc_scaffold_1878_curated_18
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16340..18256
DNA (1917bp) protein (639aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1D2_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER61690.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1878_curated_19
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18377..19315)
DNA (939bp) protein (313aa)
rhamnosyltransferase; K12990 rhamnosyltransferase [EC:2.4.1.-]
Rhamnosyltransferase n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IVT5_9GAMM
Rhamnosyltransferase {ECO:0000313|EMBL:EGW22942.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
scnpilot_p_inoc_scaffold_1878_curated_20
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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19465..22749
DNA (3285bp) protein (1095aa)
Glycosyl transferase family 2 n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DKN2_9GAMM
Glycosyl transferase {ECO:0000313|EMBL:AHE98942.1}; TaxID=713587 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio thiocyanoxidans ARh 4.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1878_curated_21
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22746..22976
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DKN3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AHF00204.1}; TaxID=713587 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio thiocyanoxidans ARh 4.;"
scnpilot_p_inoc_scaffold_1878_curated_22
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23064..25475)
DNA (2412bp) protein (804aa)
Glycosyl transferase, family 2 n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WFK8_VEREI
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABM56415.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
scnpilot_p_inoc_scaffold_1878_curated_23
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25762..26562
DNA (801bp) protein (267aa)
glycosyl transferase n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI000237534A
glycosyl transferase family protein; K07011
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABM56998.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
scnpilot_p_inoc_scaffold_1878_curated_24
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26575..27678
DNA (1104bp) protein (368aa)
Glycosyl transferase, family 4 n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TUP3_ACIAC
glycosyl transferase family protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_1878_curated_25
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27726..28616
DNA (891bp) protein (297aa)
acetylglutamate kinase (EC:2.7.2.8); K00930 acetylglutamate kinase [EC:2.7.2.8]
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Acetylglutamate kinase n=2 Tax=Alicycliphilus denitrificans RepID=E8TY41_ALIDB
scnpilot_p_inoc_scaffold_1878_curated_26
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28680..29852)
DNA (1173bp) protein (391aa)
Queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29]
Queuine tRNA-ribosyltransferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BTV1_9BURK
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1878_curated_27
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29918..30379
DNA (462bp) protein (154aa)
universal stress protein UspA n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003606C7A
Uspa domain-containing protein {ECO:0000313|EMBL:GAD24380.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
uspa domain-containing protein
scnpilot_p_inoc_scaffold_1878_curated_28
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30423..30809)
DNA (387bp) protein (129aa)
Uncharacterized protein n=2 Tax=Acidovorax RepID=A1WCK0_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM34574.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Displaying 28 items

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