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scnpilot_p_inoc_scaffold_1878_curated_15

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(12418..13218)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter; K09690 lipopolysaccharide transport system permease protein id=12549582 bin=BDI species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 261.0
  • Bit_score: 352
  • Evalue 3.50e-94
ABC-2 type transporter; K09690 lipopolysaccharide transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 61.7
  • Coverage: 266.0
  • Bit_score: 348
  • Evalue 2.10e-93
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.7
  • Coverage: 266.0
  • Bit_score: 348
  • Evalue 9.30e-93

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Taxonomy

Acidovorax citrulli → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 801
ATGAAAACGCTCGCGGCACAGGCCGCAGCCCTTTGGCATGCGCGCAGCCTGTGCTGGACGTTGACGCGAAGGGAAATCAGCAGCCGCTATGCCGGTACGGCACTGGGTGTGCTGTGGGCCTATGCCCAGCCGCTGCTGACCATGGCGGCCTATTACCTGGTTTTTGACGTGGTGTTTGCCATGCGCCTGGGTGCAGGCGCACCGACCCATGCCGTAGGCACTTACCTGATCGCCGGCATGCTGCCCTGGATGGCTTTCAGCGACGCGCTGACGCGAGGCATGACGAGCCTGCTGGAGTCCGCCAGCGTCTTGCAGAAAAACGCGCTGCCCCCCATGCTGTTCCCGGTGCGCGCGGTGCTGGCCAGCGCCCTGGTCTATGCGCCGCTGCTGGTGCTGCTGGTGTTTGCCTATGCGCCCTTGCACCACTTCGCTCCCGCATTGGTGGCGCTGCCGGCCCTGGTGGTGCTGCAAGTGGTGCTGTGCATGCTCTGGGGTGCAGTGCTGGCAATTCTGACAGCCGCACTGCGCGATGTGATGCAGCTCGTGACCTTTGCGCTGTCGCTGGGTATTTTCCTGTCGCCCGTGCTGTTTCCTGCCCACCTGTTCCCCGAGGCCTGGCGCTGGGCGCTGTGGCTCAATCCCATGACGGCGTGGGTCAGCAGCTACCAGGCGCTGCTGCTGCAAGGCGCTTGGCCGCCGCTGTCACACTGGATCGGCATGGCGGCCTGGCTCATGGGCGGGGCGTTACTGCTGCAAGTGCTGCTGGTGCGCAGCCGCGACCAGTTGACGGATTGGCTCTGA
PROTEIN sequence
Length: 267
MKTLAAQAAALWHARSLCWTLTRREISSRYAGTALGVLWAYAQPLLTMAAYYLVFDVVFAMRLGAGAPTHAVGTYLIAGMLPWMAFSDALTRGMTSLLESASVLQKNALPPMLFPVRAVLASALVYAPLLVLLVFAYAPLHHFAPALVALPALVVLQVVLCMLWGAVLAILTAALRDVMQLVTFALSLGIFLSPVLFPAHLFPEAWRWALWLNPMTAWVSSYQALLLQGAWPPLSHWIGMAAWLMGGALLLQVLLVRSRDQLTDWL*