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scnpilot_p_inoc_scaffold_3638_curated_5

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(6170..7150)

Top 3 Functional Annotations

Value Algorithm Source
FecR family protein n=1 Tax=Pseudomonas putida S610 RepID=V6JAT9_PSEPU similarity UNIREF
DB: UNIREF100
  • Identity: 37.0
  • Coverage: 305.0
  • Bit_score: 152
  • Evalue 8.50e-34
FecR family protein {ECO:0000313|EMBL:EST16920.1}; TaxID=1399145 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida S610.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.0
  • Coverage: 305.0
  • Bit_score: 152
  • Evalue 1.20e-33
Anti-FecI sigma factor, FecR similarity KEGG
DB: KEGG
  • Identity: 35.1
  • Coverage: 308.0
  • Bit_score: 144
  • Evalue 5.60e-32

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Taxonomy

Pseudomonas putida → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 981
ATGAGCGGCGCCGGCGTGGCGCCAGCGTGTGGCGCGGACAGCGACGATGAGGCCATCGCCTGGCTCGTGCGCCTGCGCCTGGGCACGGCCGGGCCCGGTGCCGAACAGCGGCTGGCCGCCTGGCGCGGCGCCGACGCGCGCAACGAAGCCGCCTGGCGCCGCCTGCAGGCCCTGCAGTGCGGGCTGGCGCTGCCCGCGGACTGCGGGCTGGCGCCCGACCAGGCACGCGCCGTGCTGCGGGCCACGCGCGGGCGCCCGCTGGCGCTTCAGGGGCGGCGCCTGTGCCTGGCCGCGATGGCGGCGGGCGTGGCGCTGGCCGTGCGCCAGAGCTGGCAGGCCGGCCCAGCCGAGGCGCTGGCGCACTGGACCACGGGCCCCGCGCGCCCGGGCCGCTGGACCCTGGCCGATGGCAGCGTGCTGCACGCCAACGCCAACACCGCGCTGGCGCTGCGCACCGAGGGCGTGGCGCCGCACCTGGCGCTGCTGCGCGGCGAAATCGCCTGGCTGGGCGCCGCCCGGGGGGCCGTGGTGGAGACGCCGCATCTGCGCGTGCATACCGACGCGCCCTGCGCGCTGCTCGTGCGCGCCGATGCCCAGGGCGGCTGCGCGGCCGCGCGCGACGGCGCCGCGCGGGTGGCGCCGGCCGGGCGGCACGGCGCCACCCAGCCACTGCCGCCCGGCGCCACGCTGCGCGCCGAGGCGGGTGCGCTGCACCCCTGGGACTGGCAGGGCGTGGACCCCTGGGCTTTCACGGAAGGCGTGCTGTCGGTGCGCCAGACGCCGCTGGCGGTGTTCGCGGCCGAGCTGGCGCGCCACCACGCCCGGGCCATCGGCTGCGACCCGGCGCTGGCCGCGCTGCGCGTGTCGGGCACTTTCCAGCTCGGCGACCTGGACGGCGCGCTGGCGCTGCTTGCGCGGCTGCTGCCGCTGCAGGTGCGGCACGGCTGGGGCGGCGTGCGGCTGGCGGCACTTGAAGGGTAG
PROTEIN sequence
Length: 327
MSGAGVAPACGADSDDEAIAWLVRLRLGTAGPGAEQRLAAWRGADARNEAAWRRLQALQCGLALPADCGLAPDQARAVLRATRGRPLALQGRRLCLAAMAAGVALAVRQSWQAGPAEALAHWTTGPARPGRWTLADGSVLHANANTALALRTEGVAPHLALLRGEIAWLGAARGAVVETPHLRVHTDAPCALLVRADAQGGCAAARDGAARVAPAGRHGATQPLPPGATLRAEAGALHPWDWQGVDPWAFTEGVLSVRQTPLAVFAAELARHHARAIGCDPALAALRVSGTFQLGDLDGALALLARLLPLQVRHGWGGVRLAALEG*