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scnpilot_p_inoc_scaffold_3638_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3638_curated_1
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..356
DNA (354bp) protein (118aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9RA55_CLOSW
LytTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ADL06027.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
scnpilot_p_inoc_scaffold_3638_curated_2
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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353..1639
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUF6_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL96643.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
scnpilot_p_inoc_scaffold_3638_curated_3
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1953..3329)
DNA (1377bp) protein (459aa)
Metallophosphoesterase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQI8_9BURK
Metallophosphoesterase {ECO:0000313|EMBL:EGJ10606.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative metallophosphoesterase
scnpilot_p_inoc_scaffold_3638_curated_4
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3583..6054)
DNA (2472bp) protein (824aa)
TonB-dependent receptor domain-containing protein n=1 Tax=Thauera sp. 27 RepID=N6YGX3_9RHOO
TonB-dependent receptor domain-containing protein {ECO:0000313|EMBL:ENO81393.1}; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
TonB-dependent receptor domain-containing protein
scnpilot_p_inoc_scaffold_3638_curated_5
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6170..7150)
DNA (981bp) protein (327aa)
FecR family protein n=1 Tax=Pseudomonas putida S610 RepID=V6JAT9_PSEPU
FecR family protein {ECO:0000313|EMBL:EST16920.1}; TaxID=1399145 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida S610.;"
Anti-FecI sigma factor, FecR
scnpilot_p_inoc_scaffold_3638_curated_6
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7147..7704)
DNA (558bp) protein (186aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Herbaspirillum sp. YR522 RepID=J2WCA9_9BURK
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EJN10330.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;"
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_p_inoc_scaffold_3638_curated_7
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7926..8903
DNA (978bp) protein (326aa)
Pyridoxal-5'-phosphate-dependent enzyme, beta subunit n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W749_ACISJ
serine racemase-like
Pyridoxal-5'-phosphate-dependent enzyme, beta subunit {ECO:0000313|EMBL:ABM42074.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_p_inoc_scaffold_3638_curated_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8939..9568
DNA (630bp) protein (210aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
uracil phosphoribosyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037A5887
uracil phosphoribosyltransferase-like
scnpilot_p_inoc_scaffold_3638_curated_9
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9593..11188
DNA (1596bp) protein (532aa)
Na+/Pi-cotransporter n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W746_ACISJ
Na+/picotransporter; K03324 phosphate:Na+ symporter
Na+/Pi-cotransporter {ECO:0000313|EMBL:ABM42071.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Displaying 9 items

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