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scnpilot_p_inoc_scaffold_1232_curated_22

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(21333..21851)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Acidovorax radicis RepID=UPI0002375115 similarity UNIREF
DB: UNIREF100
  • Identity: 83.7
  • Coverage: 172.0
  • Bit_score: 285
  • Evalue 4.50e-74
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 57.6
  • Coverage: 165.0
  • Bit_score: 177
  • Evalue 4.10e-42
Tax=GWA2_Burkholderiales_64_37_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.0
  • Coverage: 169.0
  • Bit_score: 295
  • Evalue 6.00e-77

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Taxonomy

GWA2_Burkholderiales_64_37_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGCCCGCCGACTCCCACCCCCTGCACGCGCTCTACAGCCACCACCATGGCTGGCTGCAGGCATGGCTGCGGCGCCGCCTGGGCTGCGCGCAGGATGCCGATGATCTGGCGCAGGACACCTTCGTGCGCCTGCTCGCGCGCCCGGCCCAGGCCGTCGCGCCCGAGGTGCTGCGCGCGCCGCGCGCCTACCTCACCACCGTGGCGCGCGGCCTGCTGGTGGACTTCTGGCGCCGCGGCGAGCTGGAGCGCGCCTACCTGGCCGACCTGGCGGCGCAGCCCGAGGCGCTGCACCCTTCGCCCGAGGAGCGCCTGGCCGCGGTGCAGATGCTGCAGGCGGTCGATGCGCTGCTGCAGGGGCTCACGCCCAAGACGCGCGCCGCCTGGCTGATGAGCCGGCTCGACGGCCTCACGCACGCCGAGATCGCGGCGCAGTTGCAGGTCTCCGTGCCGCGCGTGCGCCAGTACTTGGCCAGTGCCATGCGCCATGCCTATGCGCTGCGCTTCGGGGTGGCGCCGTGA
PROTEIN sequence
Length: 173
MPADSHPLHALYSHHHGWLQAWLRRRLGCAQDADDLAQDTFVRLLARPAQAVAPEVLRAPRAYLTTVARGLLVDFWRRGELERAYLADLAAQPEALHPSPEERLAAVQMLQAVDALLQGLTPKTRAAWLMSRLDGLTHAEIAAQLQVSVPRVRQYLASAMRHAYALRFGVAP*