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scnpilot_p_inoc_scaffold_905_curated_15

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 17145..18494

Top 3 Functional Annotations

Value Algorithm Source
Two component sigma54 specific Fis family transcriptional regulator n=1 Tax=Pseudomonas putida S16 RepID=F8FRV8_PSEPU similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 449.0
  • Bit_score: 782
  • Evalue 1.80e-223
two component sigma54 specific Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 449.0
  • Bit_score: 782
  • Evalue 5.60e-224
Two component sigma54 specific Fis family transcriptional regulator {ECO:0000313|EMBL:AEJ11235.1}; TaxID=1042876 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (strain S16).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.3
  • Coverage: 449.0
  • Bit_score: 782
  • Evalue 2.50e-223

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Taxonomy

Pseudomonas putida → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1350
ATGGCCCGCATCCTGATCGTTGACGATGACGCGGCGTTTCGCGGCAGCCTCGCGGAAATGCTGCAGGACCTTGGCCACCAAGTGCTCCAGGCCGAAACCACCGATGCGGGCCTGCACAGGTTGCGCACCGAGGACGTGGATGCCGCCATCGTCGATCTGCGGATGCCGGGAGAGGACGGCCTGGCATTCCTGCGCCGAGCGGCACGCATCTCGCAGGTGCCCAGCATCATGCTCACCGCCTATGCGAGTGGCGGCAACACCATCGAGGCGATGCGCCTGGGCGCATTCGATCATCTGACCAAGCCCGTCGCCAGGACTGCCTTGGTCGAAACGCTCGAGCGGGCCTTGCGGCGAGAAGCCGGCTCCCCGAGCCGGGGCCAGGCGGCTACCGCAGTACGCACGACAGGAGACCCCGTGGATGGCACCGAGCTGGTCAGCAGCAGCGAAGCCATGCGCCAGGTATTCAAGCGCATCGGGCTGGCCGCAGGCAGCGATGCCACCGTATTGGTCCTCGGCGAGACCGGCACGGGCAAGGAACTGGTGGCGCGGGCCCTGCACCGCAACAGTGGCAGGGCCGCCGGACCCTTCGTCGCGGTGAACTGCGCCGCGATCCCGGCCGAGCTGATGGAGAGCGAGCTGTTCGGCCACGTCAAGGGGGCGTTCACCGGCGCCGTCAGCGAGCGCACCGGGCGCTTTCGCGAGGCCGATGGCGGCACCCTGTTCCTCGATGAGATAGGCGACATGCCGCTGTCCACGCAGGCCAAGATACTGCGGGTGCTGCAGGAGCGCGAGATCACCCCCGTCGGTGCCAACCGCGTCCGGCCCGTGGACGTGCGCATCGTCGCGGCCACGCACCGGGACCTGCCCGCCGCGGTCAAGGAGGGGCGCTTCCGCGAAGACCTGTGGTACCGCCTGCAGGTGGTGCCGCTGTGGCTGCCACCGCTGCGCGAGCGCCTGGGCGACGTGCTGCTGCTGGCCGAACATTTCCTGCGCCTGCTGGGCGGCGACTCGCCCAAGCGGCTGAGTGCAGCGGCGGCCCGGCTGCTGCTGGCCCACCCTTGGCCCGGCAACGTGCGCGAACTGCGCAATGCCATGGAACGCGCGGCCATCCTCAGCCATGGCCCCGTCATCGATGCCGAACATGTCGGGCTGCAGACGCCGAATGTGCCCGCGCCGGGCCTGGACATTGACTGGGACGGCCCGATGGAACTGGCCGTCGCCCGCCTGGAACGAGAAATGATCGTGCGCGCTCTGGCAGCGGCCACCGGCAACCGCGCGGAGGCAGCGCGGCGCCTCGGGCTGTCCCGCCAGCAGCTCTACCGCAAGCTGGCCGAATTCGACCTGGACTGA
PROTEIN sequence
Length: 450
MARILIVDDDAAFRGSLAEMLQDLGHQVLQAETTDAGLHRLRTEDVDAAIVDLRMPGEDGLAFLRRAARISQVPSIMLTAYASGGNTIEAMRLGAFDHLTKPVARTALVETLERALRREAGSPSRGQAATAVRTTGDPVDGTELVSSSEAMRQVFKRIGLAAGSDATVLVLGETGTGKELVARALHRNSGRAAGPFVAVNCAAIPAELMESELFGHVKGAFTGAVSERTGRFREADGGTLFLDEIGDMPLSTQAKILRVLQEREITPVGANRVRPVDVRIVAATHRDLPAAVKEGRFREDLWYRLQVVPLWLPPLRERLGDVLLLAEHFLRLLGGDSPKRLSAAAARLLLAHPWPGNVRELRNAMERAAILSHGPVIDAEHVGLQTPNVPAPGLDIDWDGPMELAVARLEREMIVRALAAATGNRAEAARRLGLSRQQLYRKLAEFDLD*