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scnpilot_p_inoc_scaffold_900_curated_14

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(13911..14183)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbD n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IL81_BORPD similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 90.0
  • Bit_score: 183
  • Evalue 9.60e-44
trbD1; conjugal transfer protein TrbD; K03198 type IV secretion system protein VirB3 similarity KEGG
DB: KEGG
  • Identity: 97.8
  • Coverage: 90.0
  • Bit_score: 183
  • Evalue 3.00e-44
Conjugal transfer protein TrbD {ECO:0000313|EMBL:CAP42551.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 90.0
  • Bit_score: 183
  • Evalue 1.30e-43

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Taxonomy

Bordetella petrii → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
ATGAACGCCCCAGACACCTTCGCGGCCGGGTTCGAGGTGCCCCTGCACCGCTCGCTCACCGAGCCGATTCTGATGGGCGGTGCGCCGCGCACCGTGGCGATCGCCAACGGCACGCTGGCCGCCGCTGTCGGGCTGGGCCTGCAACTGTGGATTCCGGGCGTGGTGCTCTGGATCGTCGGCCATTCGCTGGCGGTGTGGGGCGCGCGCGTCGATCCGCAGTTCATGCGGGTCTTTGCTCGCCACATCAAGCACCGGCCGCTGCTGGACGTGTAG
PROTEIN sequence
Length: 91
MNAPDTFAAGFEVPLHRSLTEPILMGGAPRTVAIANGTLAAAVGLGLQLWIPGVVLWIVGHSLAVWGARVDPQFMRVFARHIKHRPLLDV*