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scnpilot_p_inoc_scaffold_1046_curated_27

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(20183..21070)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003629BC6 similarity UNIREF
DB: UNIREF100
  • Identity: 96.6
  • Coverage: 293.0
  • Bit_score: 557
  • Evalue 6.10e-156
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog {ECO:0000313|EMBL:GAD24699.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 293.0
  • Bit_score: 557
  • Evalue 8.60e-156
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 86.3
  • Coverage: 284.0
  • Bit_score: 495
  • Evalue 1.20e-137

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Taxonomy

Acidovorax sp. MR-S7 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGCACCCCGCAATACCTTCCCCCCTGGCCGGCCACACCGCCGTCTTCCAGCAGCACCGCCCGCGCCTGGCCGGCGTGGCCTACCGCATGCTGGGCAGCCGCGCCGATGCCGACGACGTGCTGCAGGACGCCTGGCTGCGCTGGCAGGCCACGCCGGCCGAGCGCGTGCACACGGCCGAGGCCTGGCTGGTGACCACCGTCACGCGGCTGTGCCTGGACCGCCTGCGCGCCGCGCGCACCGAGCGCGCGGCCTACGACGGCCCCTGGCTGCCCGAACCCTGGATCGCGCCCGACGCGGCGCCGCCCGCCGACGCGCGCGCCGAGCTGGCCAGCGACCTGTCGGTGGCGCTGCTGGTGGTGCTGGAGCGCCTCACGCCCGACGAGCGCGCGGCCTTCCTGCTGCACGACGTGTTCGACAGCGACTACGCCGAGGTGGCCGCCGTGCTGGGCAGGAGCGAGGCCGCGTGCCGCCAGCTCGTGCACCGCGCGCGCACCCAGGTGCGCCAGCGCAAGGCCCGCTTCACGGCCACGCCCGAGGCGGCGCGCGCGCTCATCGCGCGCTTCGTGCAGGCCATGCGCACGCAGGACCATGCCGCCCTGCTGGCCCTCTTCGCCGAGGACGCGCAATGGACCGCCGACGGCGGCGGCAAGGTGCGCGCGGCGAGCAAGGTGCTGCGCGGCCCGCGCGCGCTCGCGCGCCTGGCCGCCGCCGTGTGGCGCGTGTACATCCAGGGCCACCAGATCGAGCCGGTGCAGGTCAACGGCGCGCCGGGCCTGCTGCTGCGCGACGCGGGCGGCGTGCGCTCGGTGATGGCCTTCGAGACCGATGGCGTGCGCATCCACGCCGTGTACTCGGTGCTCAACCCCGACAAGCTGCGCGGCCTGTAA
PROTEIN sequence
Length: 296
MHPAIPSPLAGHTAVFQQHRPRLAGVAYRMLGSRADADDVLQDAWLRWQATPAERVHTAEAWLVTTVTRLCLDRLRAARTERAAYDGPWLPEPWIAPDAAPPADARAELASDLSVALLVVLERLTPDERAAFLLHDVFDSDYAEVAAVLGRSEAACRQLVHRARTQVRQRKARFTATPEAARALIARFVQAMRTQDHAALLALFAEDAQWTADGGGKVRAASKVLRGPRALARLAAAVWRVYIQGHQIEPVQVNGAPGLLLRDAGGVRSVMAFETDGVRIHAVYSVLNPDKLRGL*