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scnpilot_p_inoc_scaffold_1046_curated

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Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1046_curated_1
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..172
DNA (171bp) protein (57aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036C5547
UDP-N-acetylenolpyruvoylglucosamine reductase-like
scnpilot_p_inoc_scaffold_1046_curated_2
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

336..476
DNA (141bp) protein (47aa)
RNA polymerase sigma factor FecI 17 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HJK8_ACHXA
RNA polymerase sigma factor FecI; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase sigma factor FecI 17 {ECO:0000313|EMBL:ADP19240.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
scnpilot_p_inoc_scaffold_1046_curated_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(606..1007)
DNA (402bp) protein (134aa)
Mor transcription activator domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TZ76_ALIDB
mor transcription activator domain protein
Mor transcription activator domain protein {ECO:0000313|EMBL:ADU99785.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_p_inoc_scaffold_1046_curated_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1004..1705)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TZ77_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU99786.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_p_inoc_scaffold_1046_curated_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1776..2363)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TZ86_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU99795.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_p_inoc_scaffold_1046_curated_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2363..2605)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TZ87_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU99796.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_p_inoc_scaffold_1046_curated_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2602..2754)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TZ88_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU99797.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_p_inoc_scaffold_1046_curated_8
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2757..3989)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TZ89_ALIDB
ExeA protein {ECO:0000313|EMBL:KGH08738.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
hypothetical protein
scnpilot_p_inoc_scaffold_1046_curated_9
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3983..4759)
DNA (777bp) protein (259aa)
Gp09 n=3 Tax=root RepID=Q6QIE0_BPBMU
Integrase {ECO:0000313|EMBL:KGH08737.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
BcepMu9; Tn552/IS1604 rve transposase
scnpilot_p_inoc_scaffold_1046_curated_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4779..5618
DNA (840bp) protein (280aa)
phage tail tape measure protein n=1 Tax=Chryseobacterium taeanense RepID=UPI00031DEE9A
Tape measure domain protein {ECO:0000313|EMBL:KFJ09896.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
phage tape measure protein
scnpilot_p_inoc_scaffold_1046_curated_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5615..6406
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Bacillus cereus (strain 03BB102) RepID=C1EMV3_BACC3
Collagen triple helix repeat family protein {ECO:0000313|EMBL:KFJ10896.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
group-specific protein
scnpilot_p_inoc_scaffold_1046_curated_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6419..7324
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI00036FA602
Uncharacterized protein {ECO:0000313|EMBL:KFJ10349.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
hypothetical protein
scnpilot_p_inoc_scaffold_1046_curated_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7321..8016
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0003086E2E
Uncharacterized protein {ECO:0000313|EMBL:KFJ10432.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
scnpilot_p_inoc_scaffold_1046_curated_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8307..8792
DNA (486bp) protein (162aa)
Uncharacterized protein (Fragment) n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WJG2_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD32757.1}; Flags: Fragment;; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1046_curated_15
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9116..10129
DNA (1014bp) protein (338aa)
ParB domain protein nuclease n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IZK2_9BACT
Chromosome partitioning protein ParB {ECO:0000313|EMBL:KJK22112.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1046_curated_16
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10129..10821
DNA (693bp) protein (231aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SUG2_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA04079.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
scnpilot_p_inoc_scaffold_1046_curated_17
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10832..11062)
DNA (231bp) protein (77aa)
Uncharacterized protein {ECO:0000313|EMBL:KGE06458.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
scnpilot_p_inoc_scaffold_1046_curated_18
Burkholderia sp. BT03, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11323..11649
DNA (327bp) protein (109aa)
ECF subfamily RNA polymerase sigma factor n=1 Tax=Burkholderia terrae BS001 RepID=I5CVI8_9BURK
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EUC16370.1}; TaxID=1144309 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. BT03.;"
fecI; putative RNA polymerase sigma factor FecI; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_p_inoc_scaffold_1046_curated_19
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11646..12683
DNA (1038bp) protein (346aa)
Fe2+-dicitrate sensor membrane protein n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F5F4_9BURK
Fe2+-dicitrate sensor membrane protein {ECO:0000313|EMBL:EHK66468.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsenitoxydans SY8.;"
anti-FecI sigma factor FecR; K07165 transmembrane sensor
scnpilot_p_inoc_scaffold_1046_curated_20
Methylophaga lonarensis, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12778..15231
DNA (2454bp) protein (818aa)
hypothetical protein n=1 Tax=Comamonas sp. B-9 RepID=UPI00039568C4
TonB-dependent siderophore receptor {ECO:0000313|EMBL:EMR12199.1}; TaxID=1286106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga lonarensis MPL.;"
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein
scnpilot_p_inoc_scaffold_1046_curated_21
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15351..15653
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037E611C
Uncharacterized protein {ECO:0000313|EMBL:GAD24705.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
putative iron uptake protein
scnpilot_p_inoc_scaffold_1046_curated_22
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15665..17347
DNA (1683bp) protein (561aa)
peptidase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037978CD
Uncharacterized protein {ECO:0000313|EMBL:GAD24704.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
PepSY-associated TM helix domain-containing protein
scnpilot_p_inoc_scaffold_1046_curated_23
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17340..17660
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036E7C30
Uncharacterized protein {ECO:0000313|EMBL:GAD24703.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1046_curated_24
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17729..18595)
DNA (867bp) protein (289aa)
UPI0003A2A490 related cluster n=1 Tax=unknown RepID=UPI0003A2A490
Metallo-beta-lactamase {ECO:0000313|EMBL:GAD24702.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
beta-lactamase domain-containing protein
scnpilot_p_inoc_scaffold_1046_curated_25
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18702..19595
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000376BD23
Transcriptional regulator {ECO:0000313|EMBL:GAD24701.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_1046_curated_26
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19663..20121)
DNA (459bp) protein (153aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
alkylhydroperoxidase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003637CA3
alkylhydroperoxidase-like protein
scnpilot_p_inoc_scaffold_1046_curated_27
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20183..21070)
DNA (888bp) protein (296aa)
RNA polymerase sigma 70 n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003629BC6
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog {ECO:0000313|EMBL:GAD24699.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_p_inoc_scaffold_1046_curated_28
unknown

Not on your lists

21152..22501
DNA (1350bp) protein (450aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1046_curated_29
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22597..23262
DNA (666bp) protein (222aa)
membrane protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035D2495
Uncharacterized protein {ECO:0000313|EMBL:GAD24697.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein; K09125 hypothetical protein
scnpilot_p_inoc_scaffold_1046_curated_30
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23371..24714)
DNA (1344bp) protein (448aa)
argininosuccinate synthase (EC:6.3.4.5); K01940 argininosuccinate synthase [EC:6.3.4.5]
Argininosuccinate synthase {ECO:0000255|HAMAP-Rule:MF_00581}; EC=6.3.4.5 {ECO:0000255|HAMAP-Rule:MF_00581};; Citrulline--aspartate ligase {ECO:0000255|HAMAP-Rule:MF_00581}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Argininosuccinate synthase n=2 Tax=Acidovorax RepID=ASSY_ACIET rbh
Displaying items 1-30 of 39 in total

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