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scnpilot_p_inoc_scaffold_1708_curated_18

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(19010..20188)

Top 3 Functional Annotations

Value Algorithm Source
Collagen triple helix repeat-containing protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q182_ACIAP similarity UNIREF
DB: UNIREF100
  • Identity: 41.3
  • Coverage: 332.0
  • Bit_score: 216
  • Evalue 5.80e-53
collagen triple helix repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 332.0
  • Bit_score: 216
  • Evalue 1.80e-53
Collagen triple helix repeat-containing protein {ECO:0000313|EMBL:ADX45230.1}; Flags: Precursor;; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.3
  • Coverage: 332.0
  • Bit_score: 216
  • Evalue 8.10e-53

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Taxonomy

Acidovorax avenae → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1179
ATGCACTCCCGAACCACCACGCCCTCGCGGCTGCTCATGGCCCTGTGCCTGGGCACCCTGTCCCAAACCGGCATGGCCGCCGACGTCACGGTCGTGCCGCCCGCCAGCGGCGGCTTTGCCGTACGCGATGCCGCCAACAGCACCAACCGCCTGCGCGTGACCGAGAGCGGCACGGTGCTGGTGCCCGCGCTGGGCAGCGCCACAGCACAAAGCACTGCCGCCTGCTTCGACGCCACCAGCGGCCAGCTCGGCCCCTGCAGCGCGAGCGCACAGGGCGCCACCGGGCCCACGGGACCAGGCGGCCCCACCGGGCCAGCCGGACCGACAGGGCCGCAGGGCATACAGGGTGTGCAAGGGATACAGGGCGCGCCCGGCGCGACGGGCGCCATCGGGCCTGCGGGAACTGGCGCTACCGGTGCGATGGGCCCCACGGGTCCGACTGGCACAACCGGACCGACCGGCCCCACGGGCGCCGGCATGCTGACGGGCAGCGGCGCGCCCAGCAACGCACAGGGCCAGGATGGCGATTTCTACTTTGACAGTGCAGCCACCACCCTGTATGGGCCCAAGGCATCGAGCGCATGGCCGACGCCTGGCGTGAGCCTTGCAGGCGCCACCGGGGCCACGGGAGCGGTTGGGGCCACCGGGGCCGTGGGCCCGACAGGCGCGCAAGGCCTGCAGGGATCCGCAGGCCCTACAGGCCCTACGGGCAGCATCGGCCCGACCGGGCCTATCGGCTCCACGGGTGACACCGGACCGTCCGGGCCTACGGGTCCCACCGGCCCAGCAGGGTCTGGCAGCGGTGGTTTTTTCCAAACTTATATTGTTAGTTCTACAAACCTAGGCACAGGCACCACATACCTGAATGGTACTGGCGCAAATGCCAACGAGTCAGATCAGCATCGGGCCCTCCCATTAGCCTGCACTACAGGAAAGCTGGTTGCCGCGTTAACAGGCGCCAAGAATCTGACAATTACGGTTTCCGTCCGGAAAGGCGTCAACGATGCTTTTGGGGATCTCGGATTGACCTGCGCGTTATCGTCAGCCAATCCAACATGTAACATGTCTGGAGCCATCAATGTGGCAGAAGGAAATACCGTTGGAGCCCAGGTCAACCTTGGAAGTGCGAGCTTCTCCGGAACATCAACAGGGCTGCGTGTAACCTTCATGTGCCAATGA
PROTEIN sequence
Length: 393
MHSRTTTPSRLLMALCLGTLSQTGMAADVTVVPPASGGFAVRDAANSTNRLRVTESGTVLVPALGSATAQSTAACFDATSGQLGPCSASAQGATGPTGPGGPTGPAGPTGPQGIQGVQGIQGAPGATGAIGPAGTGATGAMGPTGPTGTTGPTGPTGAGMLTGSGAPSNAQGQDGDFYFDSAATTLYGPKASSAWPTPGVSLAGATGATGAVGATGAVGPTGAQGLQGSAGPTGPTGSIGPTGPIGSTGDTGPSGPTGPTGPAGSGSGGFFQTYIVSSTNLGTGTTYLNGTGANANESDQHRALPLACTTGKLVAALTGAKNLTITVSVRKGVNDAFGDLGLTCALSSANPTCNMSGAINVAEGNTVGAQVNLGSASFSGTSTGLRVTFMCQ*