ggKbase home page

scnpilot_p_inoc_scaffold_5399_curated_4

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 3074..3787

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor FliA n=2 Tax=Acidovorax RepID=A1WCF5_ACISJ similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 237.0
  • Bit_score: 426
  • Evalue 1.70e-116
FliA/WhiG family RNA polymerase sigma factor; K02405 RNA polymerase sigma factor for flagellar operon FliA similarity KEGG
DB: KEGG
  • Identity: 89.9
  • Coverage: 237.0
  • Bit_score: 426
  • Evalue 5.40e-117
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 237.0
  • Bit_score: 426
  • Evalue 2.40e-116

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidovorax ebreus → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGTACACCGCCAAAGGCCAGCTCGACCGCGATGCCCTGCTGCGCCAGCATGTACCGCTGGTGCGGCGCATTGCGCACCACATGATCGCCAAGCTGCCGCCCAACGTGGAGCTCGATGATCTGATCCAGGTCGGCATGATCGGCCTGGCCGAGGCGCTGTCGCGCTACGAGGCGGCGCAGGGCGTGCAGTTCGAGACCTTCGCCACCCAGCGCATCCGCGGCGCCATGCTCGACGAGCTGCGCGACAGCGACTGGATGAGCCGCAGCTCGCGCAAGAGCCAGAAGGACATCGAGCAGGCGCTGCACCGCGTCGAGCAGCGGCTCGGGCGCAGCCCGCTGGAATCCGAGATCGCCGCCGAGCTGGGCATGAGCCTGGAGGACTACCAGAGCCTGCTGGGCAAGGTGCGCGGCACCCAGCTTGTCTACCTCGAAGACATGCACCATGACGATGGCGACGAGGGCTTTCTCGACCGCCACGTGGCCGACGCGGGCGCCGACCCGCTGGCCATGCTGCGCGACCAGCGCCTGCGCGACGCGCTGGTGCGTGCCATCCAGGCCCTGCCCGAGCGCGAGCAGCACATCATGGGCATGTACTACGAGCACGACATGAACCTGAAAGAGATCGCCGCCGTGCTCGGCGTGACCGAATCGCGCGTGTGCCAGCTGCACAGCCAGGCCGTCGCCCGCCTGCGCACCAAGATGCGGGCGCATTGA
PROTEIN sequence
Length: 238
MYTAKGQLDRDALLRQHVPLVRRIAHHMIAKLPPNVELDDLIQVGMIGLAEALSRYEAAQGVQFETFATQRIRGAMLDELRDSDWMSRSSRKSQKDIEQALHRVEQRLGRSPLESEIAAELGMSLEDYQSLLGKVRGTQLVYLEDMHHDDGDEGFLDRHVADAGADPLAMLRDQRLRDALVRAIQALPEREQHIMGMYYEHDMNLKEIAAVLGVTESRVCQLHSQAVARLRTKMRAH*