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scnpilot_p_inoc_scaffold_5399_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_5399_curated_1
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..676
DNA (675bp) protein (225aa)
Flagellar biosynthesis protein FlhA n=2 Tax=Alicycliphilus denitrificans RepID=E8TSX8_ALIDB
flagellar biosynthesis protein flhA-like
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:AEB86532.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_p_inoc_scaffold_5399_curated_2
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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673..2301
DNA (1629bp) protein (543aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036E6558
ATPase AAA; K02404 flagellar biosynthesis protein FlhF
AAA ATPase {ECO:0000313|EMBL:ACM34527.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_p_inoc_scaffold_5399_curated_3
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2294..3067
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TSY0_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO25147.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_5399_curated_4
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3074..3787
DNA (714bp) protein (238aa)
RNA polymerase sigma factor FliA n=2 Tax=Acidovorax RepID=A1WCF5_ACISJ
FliA/WhiG family RNA polymerase sigma factor; K02405 RNA polymerase sigma factor for flagellar operon FliA
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_p_inoc_scaffold_5399_curated_5
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4013..4360)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000361D21F
Uncharacterized protein {ECO:0000313|EMBL:GAD23899.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scnpilot_p_inoc_scaffold_5399_curated_6
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4428..4742)
DNA (315bp) protein (105aa)
Flagellar biosynthesis anti-sigma factor protein FlgM n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q7L5_ACIAP
flagellar biosynthesis anti-sigma factor protein FlgM; K02398 negative regulator of flagellin synthesis FlgM
Flagellar biosynthesis anti-sigma factor protein FlgM {ECO:0000313|EMBL:ADX48197.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scnpilot_p_inoc_scaffold_5399_curated_7
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4841..5590)
DNA (750bp) protein (250aa)
flagellar basal body P-ring formation protein FlgA n=1 Tax=Acidovorax radicis RepID=UPI00023778AA
flagella basal body P-ring formation protein FlgA; K02386 flagella basal body P-ring formation protein FlgA
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_5399_curated_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5769..6194
DNA (426bp) protein (142aa)
flagellar biosynthesis protein FlgB n=1 Tax=Acidovorax radicis RepID=UPI00023778AB
flagellar basal-body rod protein flgB-like
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_5399_curated_9
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6214..6618
DNA (405bp) protein (135aa)
Flagellar basal-body rod protein FlgC n=1 Tax=Acidovorax sp. KKS102 RepID=K0IEQ5_9BURK
flagellar basal-body rod protein flgC-like
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_5399_curated_10
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6622..7290
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036EE6F9
basal-body rod modification protein flgD-like
Flagellar hook capping protein {ECO:0000313|EMBL:GAD23894.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_p_inoc_scaffold_5399_curated_11

Not on your lists

7322..8569
DNA (1248bp) protein (416aa)
Flagellar hook protein FlgE n=1 Tax=uncultured bacterium A1Q1_fos_660 RepID=L7VQ04_9BACT
Flagellar hook protein FlgE {ECO:0000313|EMBL:AGC70972.1}; TaxID=1256588 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_660.;"
flagellar hook-basal body protein; K02390 flagellar hook protein FlgE
scnpilot_p_inoc_scaffold_5399_curated_12
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8595..9335
DNA (741bp) protein (247aa)
Flagellar basal-body rod protein FlgF n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTK4_ALIDB
flagellar basal-body rod protein flgF-like
Flagellar basal-body rod protein FlgF {ECO:0000313|EMBL:ADV01590.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_p_inoc_scaffold_5399_curated_13
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9356..10138
DNA (783bp) protein (261aa)
Flagellar basal-body rod protein FlgG n=1 Tax=uncultured bacterium A1Q1_fos_660 RepID=L7VU69_9BACT
flagellar basal-body rod protein FlgG
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_5399_curated_14
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10147..10845
DNA (699bp) protein (233aa)
Flagellar L-ring protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MGE4_ACIET
flagellar l-ring protein; K02393 flagellar L-ring protein precursor FlgH
Flagellar L-ring protein {ECO:0000313|EMBL:ACM34539.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_p_inoc_scaffold_5399_curated_15
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10981..11745
DNA (765bp) protein (255aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU003440}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00219};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU003440};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Dihydroorotase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MFV8_ACIET
dihydroorotase-like
Displaying 15 items

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