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scnpilot_p_inoc_scaffold_1451_curated

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1451_curated_1
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..749)
DNA (747bp) protein (249aa)
carboxyl transferase; K01966 propionyl-CoA carboxylase beta chain [EC:6.4.1.3]
Propionyl-CoA carboxylase carboxyltransferase subunit n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W7J3_ACISJ
Methylmalonyl-CoA carboxyltransferase {ECO:0000313|EMBL:KJA12363.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
scnpilot_p_inoc_scaffold_1451_curated_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(804..1811)
DNA (1008bp) protein (336aa)
LAO/AO transport system ATPase; K07588 LAO/AO transport system kinase [EC:2.7.-.-]
LAO/AO transport system ATPase n=2 Tax=Alicycliphilus denitrificans RepID=E8U1N5_ALIDB
LAO/AO transport system ATPase {ECO:0000313|EMBL:AEB84841.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_p_inoc_scaffold_1451_curated_3
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1808..3979)
DNA (2172bp) protein (724aa)
Methylmalonyl-CoA mutase, large subunit {ECO:0000313|EMBL:ACM33306.1}; EC=5.4.99.2 {ECO:0000313|EMBL:ACM33306.1};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
methylmalonyl-CoA mutase (EC:5.4.99.2); K01847 methylmalonyl-CoA mutase [EC:5.4.99.2]
Methylmalonyl-CoA mutase, large subunit n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MJG8_ACIET
scnpilot_p_inoc_scaffold_1451_curated_4
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4099..4734
DNA (636bp) protein (212aa)
Transcriptional regulator n=1 Tax=Acidovorax sp. CF316 RepID=J0U8F3_9BURK
GntR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_1451_curated_5
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4835..6685
DNA (1851bp) protein (617aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
AMP-dependent synthetase and ligase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MJG6_ACIET
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_1451_curated_6
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6801..7502
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Acidovorax avenae RepID=UPI0002DBAB14
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_1451_curated_7
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7539..8651)
DNA (1113bp) protein (371aa)
Saccharopine dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HT48_9BURK
saccharopine dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_1451_curated_8
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8791..9240
DNA (450bp) protein (150aa)
Transcriptional regulator, AsnC family n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WEK4_VEREI
AsnC family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_1451_curated_9
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9418..10011)
DNA (594bp) protein (198aa)
glycerol acyltransferase n=1 Tax=Acidovorax radicis RepID=UPI00023754AD
acyltransferase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_1451_curated_10
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10204..10704)
DNA (501bp) protein (167aa)
OmpA/MotB domain protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T470_ACIDE
ompa/motb domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_1451_curated_11
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10780..11367
DNA (588bp) protein (196aa)
Chac family protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZ20_9BURK
chac family protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_1451_curated_12
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11504..12151
DNA (648bp) protein (216aa)
pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5); K00275 pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G8A9_ALIDK
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_1451_curated_13
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12295..13242)
DNA (948bp) protein (316aa)
Cyanophycinase-like protein; K13282 cyanophycinase [EC:3.4.15.6]
Uncharacterized protein {ECO:0000313|EMBL:KJA09273.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
Cyanophycinase-like protein id=4958563 bin=GWA2_Elusi_like_61_42 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
scnpilot_p_inoc_scaffold_1451_curated_14
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13399..14436)
DNA (1038bp) protein (346aa)
Patatin n=1 Tax=Acidovorax avenae RepID=UPI000370F875
patatin; K07001 NTE family protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1451_curated_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14769..15479
DNA (711bp) protein (237aa)
RNP-1 like RNA-binding protein id=12552700 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
RNP-1 like RNA-binding protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1451_curated_16
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15651..16025
DNA (375bp) protein (125aa)
hypothetical protein id=12552703 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1451_curated_17
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16025..16723
DNA (699bp) protein (233aa)
res domain protein id=12552702 bin=BDI species=Ideonella sp. B508-1 genus=Ideonella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
res domain protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1451_curated_18
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16820..17095)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI0003637646
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
scnpilot_p_inoc_scaffold_1451_curated_19
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17290..18912)
DNA (1623bp) protein (541aa)
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C3P9_9BURK
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EHL20736.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
scnpilot_p_inoc_scaffold_1451_curated_20
unknown

Not on your lists

19968..20414
DNA (447bp) protein (149aa)

This feature has no annotations

Displaying 20 items

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