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scnpilot_p_inoc_scaffold_665_curated

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_665_curated_1
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..749)
DNA (747bp) protein (249aa)
nitrate reductase, beta subunit; K00371 nitrate reductase 1, beta subunit [EC:1.7.99.4]
Nitrate reductase, beta subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8TWE2_ALIDB
Nitrate reductase, beta subunit {ECO:0000313|EMBL:ADU98280.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_p_inoc_scaffold_665_curated_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(772..4566)
DNA (3795bp) protein (1265aa)
nitrate reductase, alpha subunit; K00370 nitrate reductase 1, alpha subunit [EC:1.7.99.4]
nitrate reductase A subunit alpha n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003684D4D
Nitrate reductase alpha subunit {ECO:0000313|EMBL:GAD23004.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_p_inoc_scaffold_665_curated_3
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4610..6238)
DNA (1629bp) protein (543aa)
antiporter n=1 Tax=Methyloversatilis universalis RepID=UPI00037F4F20
Nitrite facilitator 1 {ECO:0000313|EMBL:KFB69442.1}; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
nitrate/nitrite antiporter; K02575 MFS transporter, NNP family, nitrate/nitrite transporter
scnpilot_p_inoc_scaffold_665_curated_4
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6252..7541)
DNA (1290bp) protein (430aa)
Major facilitator superfamily protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HU37_9BURK
Major facilitator transporter {ECO:0000313|EMBL:KJA10865.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
major facilitator superfamily protein
scnpilot_p_inoc_scaffold_665_curated_5
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7701..8399)
DNA (699bp) protein (233aa)
Two component LuxR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5L6_9BURK
XRE family transcriptional regulator {ECO:0000313|EMBL:KJA10866.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
two component LuxR family transcriptional regulator
scnpilot_p_inoc_scaffold_665_curated_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8396..10312)
DNA (1917bp) protein (639aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWF9_9BURK
multi-sensor signal transduction histidine kinase
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:AFU44190.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_665_curated_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10352..11203
DNA (852bp) protein (284aa)
purU; formyltetrahydrofolate deformylase (EC:3.5.1.10) id=12551314 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
formyltetrahydrofolate deformylase; K01433 formyltetrahydrofolate deformylase [EC:3.5.1.10]
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_665_curated_8
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11211..12122
DNA (912bp) protein (304aa)
Transcriptional regulator n=1 Tax=Polaromonas sp. CF318 RepID=J2TXP1_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EJL83557.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_665_curated_9
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12139..12546)
DNA (408bp) protein (136aa)
AAA ATPase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RIP8_ACCPU
AAA ATPase
AAA ATPase {ECO:0000313|EMBL:ACV36622.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
scnpilot_p_inoc_scaffold_665_curated_10
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12571..13644)
DNA (1074bp) protein (358aa)
AAA ATPase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RIP8_ACCPU
AAA ATPase
AAA ATPase {ECO:0000313|EMBL:ACV36622.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
scnpilot_p_inoc_scaffold_665_curated_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13939..15435
DNA (1497bp) protein (499aa)
D-lactate dehydrogenase (EC:1.1.2.4); K00104 glycolate oxidase [EC:1.1.3.15]
FAD linked oxidase domain-containing protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C484_9BURK
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_665_curated_12
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15445..15792
DNA (348bp) protein (116aa)
LrgA n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQA3_9BURK
LrgA
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
scnpilot_p_inoc_scaffold_665_curated_13
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15785..16510
DNA (726bp) protein (242aa)
LrgB-like protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q221E8_RHOFD
LrgB-like protein
LrgB-like protein {ECO:0000313|EMBL:ABD68355.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
scnpilot_p_inoc_scaffold_665_curated_14
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16505..17398)
DNA (894bp) protein (298aa)
Putative glycine cleavage system transcriptional activator (Gcv operon activator)(gcvA) id=12551318 bin=BDI species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
RSp1593; transcriptional regulator rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_665_curated_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17560..19092
DNA (1533bp) protein (511aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
aldehyde dehydrogenase n=1 Tax=Comamonas sp. B-9 RepID=UPI0003959E56
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_665_curated_16
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19266..20441
DNA (1176bp) protein (392aa)
fad dependent oxidoreductase id=12551322 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
fad dependent oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_665_curated_17
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20431..22122
DNA (1692bp) protein (564aa)
thiamine pyrophosphate protein n=1 Tax=Curvibacter lanceolatus RepID=UPI0003683FDC
thiamine pyrophosphate protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_665_curated_18
Capitella teleta, Capitella, Capitellida, Scolecida, Annelida, Metazoa

Not on your lists

comp(26073..27146)
DNA (1074bp) protein (358aa)
Uncharacterized protein (Fragment) n=1 Tax=Capitella teleta RepID=R7V0M7_CAPTE
Uncharacterized protein {ECO:0000313|EMBL:ELU09762.1, ECO:0000313|EnsemblMetazoa:CapteP92370}; Flags: Fragment;; TaxID=283909 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Polychaeta; Scolecida; Capitellida; Capitellidae; Capitella.;" source="Capitella teleta (Polychaete worm).;"
hypothetical protein
scnpilot_p_inoc_scaffold_665_curated_19
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29658..30233)
DNA (576bp) protein (192aa)
CRISPR-associated protein, Csy4 family n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W3B0_ACISJ
CRISPR-associated Csy4 family protein
CRISPR-associated protein, Csy4 family {ECO:0000313|EMBL:ABM40735.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_p_inoc_scaffold_665_curated_20
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30247..31272)
DNA (1026bp) protein (342aa)
CRISPR-associated protein, Csy3 family n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W3B1_ACISJ
CRISPR-associated Csy3 family protein
CRISPR-associated protein, Csy3 family {ECO:0000313|EMBL:ABM40736.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_p_inoc_scaffold_665_curated_21
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31328..32398)
DNA (1071bp) protein (357aa)
CRISPR-associated protein, Csy2 family n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W3B2_ACISJ
CRISPR-associated Csy2 family protein
CRISPR-associated protein, Csy2 family {ECO:0000313|EMBL:ABM40737.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_p_inoc_scaffold_665_curated_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32395..33726)
DNA (1332bp) protein (444aa)
CRISPR-associated protein, Csy1 family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BUF4_DELAS
CRISPR-associated Csy1 family protein
CRISPR-associated protein, Csy1 family {ECO:0000313|EMBL:ABX33857.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_p_inoc_scaffold_665_curated_23
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33889..34170
DNA (282bp) protein (94aa)
Plasmid maintenance system killer n=1 Tax=Acidovorax delafieldii 2AN RepID=C5SZJ8_ACIDE
Plasmid maintenance system killer {ECO:0000313|EMBL:EER62394.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
plasmid maintenance system killer protein; K07334 proteic killer suppression protein
scnpilot_p_inoc_scaffold_665_curated_24
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34231..34542
DNA (312bp) protein (104aa)
Plasmid maintenance system antidote protein, XRE family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5SZJ9_ACIDE
Plasmid maintenance system antidote protein, XRE family {ECO:0000313|EMBL:EER62395.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
XRE family transcriptional regulator
scnpilot_p_inoc_scaffold_665_curated_25
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34548..38060)
DNA (3513bp) protein (1171aa)
CRISPR-associated helicase, Cas3 family n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W3B4_ACISJ
CRISPR-associated helicase, Cas3 family {ECO:0000313|EMBL:ABM40739.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
CRISPR-associated helicase Cas3 family protein
scnpilot_p_inoc_scaffold_665_curated_26
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38057..39061)
DNA (1005bp) protein (335aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W3B5_ACISJ
CRISPR-associated Cas1 family protein; K15342 CRISP-associated protein Cas1
scnpilot_p_inoc_scaffold_665_curated_27
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39081..39599)
DNA (519bp) protein (173aa)
methylated-DNA/protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035DA74E
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_665_curated_28
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39613..40743)
DNA (1131bp) protein (377aa)
class V aminotransferase id=12551326 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
class V aminotransferase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_665_curated_29
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40875..44180)
DNA (3306bp) protein (1102aa)
Carbamoyl-phosphate synthase L chain, ATP-binding protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C478_9BURK
carbamoyl-phosphate synthase ATP-binding subunit L
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_665_curated_30
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44440..46047)
DNA (1608bp) protein (536aa)
AMP-dependent synthetase n=1 Tax=Acidovorax radicis RepID=UPI0002377BF6
AMP-dependent synthetase and ligase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
Displaying items 1-30 of 35 in total

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