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scnpilot_p_inoc_scaffold_767_curated

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Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_767_curated_1
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

204..602
DNA (399bp) protein (133aa)
HTH-type transcriptional regulator cueR-like id=12550644 bin=BDI species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
HTH-type transcriptional regulator cueR-like
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_767_curated_2

Not on your lists

636..1097
DNA (462bp) protein (154aa)
Thioesterase superfamily protein n=1 Tax=uncultured bacterium RepID=K2EEZ4_9BACT
Thioesterase superfamily protein {ECO:0000313|EMBL:EKD97099.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_p_inoc_scaffold_767_curated_3
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1130..2320
DNA (1191bp) protein (397aa)
isovaleryl-CoA dehydrogenase (EC:1.3.99.10); K00253 isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:ABM43888.1}; EC=1.3.8.4 {ECO:0000313|EMBL:ABM43888.1};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Isovaleryl-CoA dehydrogenase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WCB3_ACISJ
scnpilot_p_inoc_scaffold_767_curated_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2365..3024
DNA (660bp) protein (220aa)
carbonate dehydratase id=12550641 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
carbonate dehydratase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_767_curated_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3060..4871
DNA (1812bp) protein (604aa)
aceK; bifunctional isocitrate dehydrogenase kinase/phosphatase (EC:3.1.3.-) id=12550640 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
aceK; bifunctional isocitrate dehydrogenase kinase/phosphatase (EC:3.1.3.-)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_767_curated_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4913..6103
DNA (1191bp) protein (397aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] id=12550639 bin=BDI species=Acidovorax sp. MR-S7 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_767_curated_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6171..6839
DNA (669bp) protein (223aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MG91_ACIET
short chain dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_767_curated_8
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7011..7730
DNA (720bp) protein (240aa)
Carbonic anhydrase (Fragment) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TC84_ACIDE
putative carbonic anhydrase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_767_curated_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7890..9020
DNA (1131bp) protein (377aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IEI2_9BURK
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:AFU47821.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_767_curated_10
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9089..9556)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MG89_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM34484.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_p_inoc_scaffold_767_curated_11
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9725..10390
DNA (666bp) protein (222aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WCA7_ACISJ
HAD family hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:ABM43882.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_p_inoc_scaffold_767_curated_12
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10538..12283)
DNA (1746bp) protein (582aa)
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein id=12550633 bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_767_curated_13
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12460..12879
DNA (420bp) protein (140aa)
UPF0225 protein Rta_05745 n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XW82_RAMTT
UPF0225 protein RP29_06780 {ECO:0000256|HAMAP-Rule:MF_00612}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein; K09858 SEC-C motif domain protein
scnpilot_p_inoc_scaffold_767_curated_14
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12917..13921)
DNA (1005bp) protein (335aa)
AraC family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5E5_9BURK
AraC family transcriptional regulator {ECO:0000313|EMBL:KJA11234.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
araC family transcriptional regulator
scnpilot_p_inoc_scaffold_767_curated_15
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14147..15754
DNA (1608bp) protein (536aa)
propionyl-CoA carboxylase (EC:6.4.1.3); K01969 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
Methylcrotonoyl-CoA carboxylase {ECO:0000313|EMBL:KJA11137.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
propionyl-CoA carboxylase id=12553021 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
scnpilot_p_inoc_scaffold_767_curated_16
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15786..16295
DNA (510bp) protein (170aa)
DinB family protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WC96_ACISJ
DinB family protein
DinB family protein {ECO:0000313|EMBL:ABM43871.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_p_inoc_scaffold_767_curated_17
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16292..17074
DNA (783bp) protein (261aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:KJA11139.1}; EC=4.2.1.17 {ECO:0000313|EMBL:KJA11139.1};; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase/isomerase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T2N5_ACIDE
scnpilot_p_inoc_scaffold_767_curated_18
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17095..19134
DNA (2040bp) protein (680aa)
3-methylcrotonoyl-CoA carboxylase subunit alpha n=1 Tax=Acidovorax sp. KKS102 RepID=K0I922_9BURK
3-methylcrotonoyl-CoA carboxylase subunit alpha
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_767_curated_19
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19172..20092
DNA (921bp) protein (307aa)
d-isomer specific 2-hydroxyacid dehydrogenase; K12972 gyoxylate/hydroxypyruvate reductase A [EC:1.1.1.79 1.1.1.81]
d-isomer specific 2-hydroxyacid dehydrogenase id=12553015 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_767_curated_20
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20121..21026
DNA (906bp) protein (302aa)
pyruvate carboxyltransferase; K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] id=12553013 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hydroxymethylglutaryl-CoA lyase (EC:4.1.3.4); K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_767_curated_21
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21070..21582
DNA (513bp) protein (171aa)
YbaK/prolyl-tRNA synthetase associated protein id=12553011 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
YbaK/prolyl-tRNA synthetase associated domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_767_curated_22
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21579..21848
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T2M5_ACIDE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_767_curated_23
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21845..22489
DNA (645bp) protein (215aa)
DSBA oxidoreductase n=1 Tax=Acidovorax radicis RepID=UPI0002376702
DSBA oxidoreductase {ECO:0000313|EMBL:KJA11145.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
DSBA oxidoreductase
scnpilot_p_inoc_scaffold_767_curated_24
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22673..24352
DNA (1680bp) protein (560aa)
Major facilitator superfamily MFS_1 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T2L9_ACIDE
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EER61264.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
general substrate transporter
scnpilot_p_inoc_scaffold_767_curated_25
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24475..24621
DNA (147bp) protein (49aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI000381A1E1
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
scnpilot_p_inoc_scaffold_767_curated_26
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24690..25178
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000363D26E
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
scnpilot_p_inoc_scaffold_767_curated_27
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25317..31253
DNA (5937bp) protein (1979aa)
Excinuclease ABC, A subunit n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MFW0_ACIET
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
excinuclease ABC subunit A; K03701 excinuclease ABC subunit A
scnpilot_p_inoc_scaffold_767_curated_28
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31265..31609
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5C0_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_767_curated_29
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31635..33239)
DNA (1605bp) protein (535aa)
Chemotaxis sensory transducer n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KRL4_9BURK
Chemotaxis sensory transducer {ECO:0000313|EMBL:EGI77613.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
methyl-accepting chemotaxis sensory transducer; K05874 methyl-accepting chemotaxis protein I, serine sensor receptor
scnpilot_p_inoc_scaffold_767_curated_30
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33406..35109
DNA (1704bp) protein (568aa)
Cytochrome-c oxidase {ECO:0000313|EMBL:AEB84035.1}; EC=1.9.3.1 {ECO:0000313|EMBL:AEB84035.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
cytochrome-c oxidase (EC:1.9.3.1); K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1]
Cytochrome-c oxidase n=2 Tax=Alicycliphilus denitrificans RepID=E8TV14_ALIDB
Displaying items 1-30 of 41 in total

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