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scnpilot_p_inoc_scaffold_1607_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1607_curated_1
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..493
DNA (492bp) protein (164aa)
electron-transferring-flavoprotein dehydrogenase id=12553239 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
electron-transferring-flavoprotein dehydrogenase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_1607_curated_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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692..1444
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000377472E
UPF0271 protein AVS7_03580 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
lamb/ycsf family protein; K07160 UPF0271 protein
scnpilot_p_inoc_scaffold_1607_curated_3
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1441..3099
DNA (1659bp) protein (553aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037BE4BC
Allophanate hydrolase subunit 2 {ECO:0000313|EMBL:GAD23819.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
urea amidolyase
scnpilot_p_inoc_scaffold_1607_curated_4
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3096..4847
DNA (1752bp) protein (584aa)
carbamoyl-phosphate synthase l chain ATP-binding protein; K11263 acetyl-/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.3.4.14]
UPI0003AA51D4 related cluster n=1 Tax=unknown RepID=UPI0003AA51D4
Acetyl/propionyl-CoA carboxylase, alpha subunit {ECO:0000313|EMBL:GAD23818.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_p_inoc_scaffold_1607_curated_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4959..5660
DNA (702bp) protein (234aa)
Transcriptional regulator, TetR family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CW71_VARPS
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACS16769.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
scnpilot_p_inoc_scaffold_1607_curated_6
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5654..6727
DNA (1074bp) protein (358aa)
C4-dicarboxylate-binding periplasmic protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMH8_TISMK
dctP; C4-dicarboxylate-binding periplasmic protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
scnpilot_p_inoc_scaffold_1607_curated_7
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6738..7313
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMH7_TISMK
hypothetical protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
scnpilot_p_inoc_scaffold_1607_curated_8
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7310..8641
DNA (1332bp) protein (444aa)
TRAP transporter, DctM-like membrane protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMH6_TISMK
siaT; TRAP transporter, DctM-like membrane protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
scnpilot_p_inoc_scaffold_1607_curated_9
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8646..9683
DNA (1038bp) protein (346aa)
SMP-30/Gluconolaconase/LRE domain-containing protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TLV7_TISMK
SMP-30/gluconolaconase/LRE domain-containing protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
scnpilot_p_inoc_scaffold_1607_curated_10
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9703..10512
DNA (810bp) protein (270aa)
Cyclase family protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CW66_VARPS
cyclase family protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
scnpilot_p_inoc_scaffold_1607_curated_11
Pseudomonas sp. CMAA1215, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10580..11893
DNA (1314bp) protein (438aa)
fumarylacetoacetase (EC:3.7.1.2); K01555 fumarylacetoacetase [EC:3.7.1.2]
Uncharacterized protein n=1 Tax=Pseudomonas sp. CMAA1215 RepID=U7A3E8_9PSED
Uncharacterized protein {ECO:0000313|EMBL:ERO64159.1}; TaxID=1387231 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CMAA1215.;"
scnpilot_p_inoc_scaffold_1607_curated_12
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11894..12400)
DNA (507bp) protein (169aa)
Transcriptional regulator, AsnC family n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HMV6_RUBGI
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:BAL94343.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
scnpilot_p_inoc_scaffold_1607_curated_13
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12519..13697
DNA (1179bp) protein (393aa)
peptidase M20D family protein; K01451 hippurate hydrolase [EC:3.5.1.32]
Amidohydrolase n=1 Tax=Acidovorax sp. CF316 RepID=J0U4W0_9BURK
Amidohydrolase {ECO:0000313|EMBL:EJE51137.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
scnpilot_p_inoc_scaffold_1607_curated_14
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13694..16168
DNA (2475bp) protein (825aa)
N-carbamoyl-L-amino acid hydrolase (EC:3.5.1.87)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037DFD9B
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases {ECO:0000313|EMBL:GAD21519.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_p_inoc_scaffold_1607_curated_15
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16170..16589)
DNA (420bp) protein (140aa)
RNA-binding S4 domain protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q3Z2_ACIAP
RNA-binding S4 domain-containing protein; K04762 ribosome-associated heat shock protein Hsp15
RNA-binding S4 domain protein {ECO:0000313|EMBL:ADX46701.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scnpilot_p_inoc_scaffold_1607_curated_16
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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16638..18140
DNA (1503bp) protein (501aa)
pas modulated Fis family transcriptional regulator id=12549693 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
pas modulated Fis family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1607_curated_17
unknown

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18292..18390
DNA (99bp) protein (33aa)

This feature has no annotations

Displaying 17 items

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