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scnpilot_p_inoc_scaffold_351_curated

Search features with annotation key words

Displaying items 1-30 of 162 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_351_curated_1
unknown

Not on your lists

comp(2..61)
DNA (60bp) protein (20aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_351_curated_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(116..889)
DNA (774bp) protein (258aa)
hypothetical protein id=12549610 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_351_curated_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(929..1588)
DNA (660bp) protein (220aa)
TetR family transcriptional regulator id=12552841 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
TetR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_351_curated_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1778..2422)
DNA (645bp) protein (215aa)
poly granule associated protein id=12549608 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
poly granule associated protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_351_curated_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2656..4641
DNA (1986bp) protein (662aa)
short-chain dehydrogenase n=1 Tax=Acidovorax radicis RepID=UPI0002376303
short chain dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_351_curated_6
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4716..5783
DNA (1068bp) protein (356aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W3G2_ACISJ
scnpilot_p_inoc_scaffold_351_curated_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5780..6670
DNA (891bp) protein (297aa)
dtdp-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] id=12552848 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
dtdp-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_351_curated_8
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6688..7572
DNA (885bp) protein (295aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
glucose-1-phosphate thymidylyltransferase n=1 Tax=Acidovorax radicis RepID=UPI0002376300
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_351_curated_9
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7590..8132
DNA (543bp) protein (181aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Acidovorax sp. CF316 RepID=J0UBW2_9BURK
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EJE53642.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
scnpilot_p_inoc_scaffold_351_curated_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8206..9120
DNA (915bp) protein (305aa)
rhamnosyltransferase; K12990 rhamnosyltransferase [EC:2.4.1.-]
Rhamnosyltransferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5D6_ALIDK
Rhamnosyltransferase {ECO:0000313|EMBL:AEB83028.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_p_inoc_scaffold_351_curated_11

Not on your lists

comp(9137..12415)
DNA (3279bp) protein (1093aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2CWA5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD97305.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Glycosyl transferase, group 2 family protein
scnpilot_p_inoc_scaffold_351_curated_12
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12456..13751)
DNA (1296bp) protein (432aa)
Putative membrane protein (DUF2142) n=1 Tax=Acidovorax sp. CF316 RepID=J1EJ94_9BURK
Putative membrane protein (DUF2142) {ECO:0000313|EMBL:EJE52356.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
hypothetical protein
scnpilot_p_inoc_scaffold_351_curated_13
Pseudomonas sp. StFLB209, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13844..14203)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X4Z0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:BAP46042.1}; TaxID=1028989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. StFLB209.;"
hypothetical protein
scnpilot_p_inoc_scaffold_351_curated_14
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14200..15192)
DNA (993bp) protein (331aa)
Glycosyl transferase, group 2 family protein n=1 Tax=Pseudomonas fluorescens WH6 RepID=E2XTI4_PSEFL
Strain UM270 sctg_0052_0001, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ59936.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
family 2 glycosyl transferase
scnpilot_p_inoc_scaffold_351_curated_15
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15307..16398)
DNA (1092bp) protein (364aa)
Acyltransferase 3 n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E6H0_9GAMM
Fucose 4-O-acetylase {ECO:0000313|EMBL:KFB67131.1}; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
putative exopolysaccharide production protein ExoZ
scnpilot_p_inoc_scaffold_351_curated_16
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16400..17518)
DNA (1119bp) protein (373aa)
N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase {ECO:0000313|EMBL:KFB67132.1}; EC=2.4.1.289 {ECO:0000313|EMBL:KFB67132.1};; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
Glycosyltransferase, group 2 family protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8EYH0_9DELT
putative glycosyltransferase
scnpilot_p_inoc_scaffold_351_curated_17
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17496..19661)
DNA (2166bp) protein (722aa)
Methyltransferase family protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EMZ8_9BURK
Bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase {ECO:0000313|EMBL:KFB67133.1}; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
hypothetical protein
scnpilot_p_inoc_scaffold_351_curated_18
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19658..20398)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KJ05_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJE53630.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
scnpilot_p_inoc_scaffold_351_curated_19
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20395..21366)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Halomonas jeotgali RepID=UPI00034A2C5F
Uncharacterized protein {ECO:0000313|EMBL:KFB78209.1}; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
hypothetical protein
scnpilot_p_inoc_scaffold_351_curated_20
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21402..22613)
DNA (1212bp) protein (404aa)
Teichoic acids export ATP-binding protein TagH {ECO:0000313|EMBL:KFB67127.1}; EC=3.6.3.40 {ECO:0000313|EMBL:KFB67127.1};; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
ABC-type polysaccharide/polyol phosphate transport system, ATPase component n=1 Tax=Acidovorax sp. CF316 RepID=J1EMZ3_9BURK
ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein rbh
scnpilot_p_inoc_scaffold_351_curated_21
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22603..23409)
DNA (807bp) protein (269aa)
ABC-type polysaccharide/polyol phosphate export system, permease component n=1 Tax=Acidovorax sp. CF316 RepID=J0KJ03_9BURK
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
ABC transporter; K09690 lipopolysaccharide transport system permease protein
scnpilot_p_inoc_scaffold_351_curated_22
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23464..24126)
DNA (663bp) protein (221aa)
cAMP-binding protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EN73_9BURK
cAMP-binding protein {ECO:0000313|EMBL:EJE53624.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
Crp/Fnr family transcriptional regulator
scnpilot_p_inoc_scaffold_351_curated_23
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24265..25614
DNA (1350bp) protein (450aa)
hypothetical protein n=1 Tax=Aquaspirillum serpens RepID=UPI0003B7975A
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
scnpilot_p_inoc_scaffold_351_curated_24
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25615..27582
DNA (1968bp) protein (656aa)
adenylate cyclase with chase2 domain (EC:4.6.1.1); K01768 adenylate cyclase [EC:4.6.1.1]
Putative transmembrane sensor domain protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EA24_9BURK
Putative transmembrane sensor domain protein {ECO:0000313|EMBL:EJE49276.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
scnpilot_p_inoc_scaffold_351_curated_25
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27548..28960
DNA (1413bp) protein (471aa)
Tetratricopeptide repeat protein n=1 Tax=Acidovorax sp. CF316 RepID=J0TZB4_9BURK
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EJE49277.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
scnpilot_p_inoc_scaffold_351_curated_26
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29295..33188
DNA (3894bp) protein (1298aa)
Serralysin {ECO:0000313|EMBL:KFB78193.1}; EC=3.4.24.40 {ECO:0000313|EMBL:KFB78193.1};; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
Uncharacterized protein n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=A6Q736_SULNB
hypothetical protein
scnpilot_p_inoc_scaffold_351_curated_27
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33409..34530
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W3I7_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM40812.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_p_inoc_scaffold_351_curated_28

Not on your lists

34620..34892
DNA (273bp) protein (91aa)
Addiction module antitoxin, RelB/DinJ family n=1 Tax=mine drainage metagenome RepID=T1BYQ5_9ZZZZ
Addiction module antitoxin, RelB/DinJ family {ECO:0000313|EMBL:EQD74857.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
addiction module antitoxin; K07473 DNA-damage-inducible protein J
scnpilot_p_inoc_scaffold_351_curated_29
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34864..35193
DNA (330bp) protein (110aa)
Plasmid stabilization system n=1 Tax=Xylella fastidiosa subsp. sandyi Ann-1 RepID=Q3R3I1_XYLFS
Translation repressor RelE {ECO:0000313|EMBL:AIC11709.1}; TaxID=155920 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fastidiosa subsp. sandyi Ann-1.;"
addiction module toxin, RelE/StbE family
scnpilot_p_inoc_scaffold_351_curated_30
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35326..37029
DNA (1704bp) protein (568aa)
hypothetical protein n=1 Tax=Pseudomonas luteola RepID=UPI00031FFE89
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
Displaying items 1-30 of 162 in total

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