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scnpilot_p_inoc_scaffold_885_curated

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Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_885_curated_1
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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277..1932
DNA (1656bp) protein (552aa)
methyl-accepting chemotaxis sensory transducer id=12550863 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
methyl-accepting chemotaxis sensory transducer
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_885_curated_2
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1963..2676)
DNA (714bp) protein (238aa)
Phosphoglycolate phosphatase {ECO:0000256|SAAS:SAAS00077902}; EC=3.1.3.18 {ECO:0000256|SAAS:SAAS00077902};; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
2-phosphoglycolate phosphatase n=1 Tax=Acidovorax sp. CF316 RepID=J1EGS5_9BURK
phosphoglycolate phosphatase
scnpilot_p_inoc_scaffold_885_curated_3
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2673..3353)
DNA (681bp) protein (227aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
Ribulose-phosphate 3-epimerase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C2P0_9BURK
ribulose-phosphate 3-epimerase
scnpilot_p_inoc_scaffold_885_curated_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3375..3785
DNA (411bp) protein (137aa)
apaG; CO2+/MG2+ efflux protein ApaG id=12550851 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
apaG; apag; K06195 ApaG protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_885_curated_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3785..5776
DNA (1992bp) protein (664aa)
recombinase n=1 Tax=Acidovorax radicis RepID=UPI000237523C
site-specific recombinase Gcr
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_885_curated_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5929..7188
DNA (1260bp) protein (420aa)
Sodium/hydrogen exchanger n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0S2_ACIDE
sodium/hydrogen exchanger
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_885_curated_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7178..8293
DNA (1116bp) protein (372aa)
carboxylate-amine ligase ybdK; K06048 carboxylate-amine ligase [EC:6.3.-.-]
Putative glutamate--cysteine ligase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Carboxylate-amine ligase Alide2_4404 n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G8I4_ALIDK
scnpilot_p_inoc_scaffold_885_curated_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8483..9466
DNA (984bp) protein (328aa)
thiamine-monophosphate kinase (EC:2.7.4.16); K00946 thiamine-monophosphate kinase [EC:2.7.4.16]
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {ECO:0000256|HAMAP-Rule:MF_02128};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Thiamine-monophosphate kinase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TVC0_ALIDB
scnpilot_p_inoc_scaffold_885_curated_9
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9477..10373)
DNA (897bp) protein (299aa)
LysR family transcriptional regulator; K03717 LysR family transcriptional regulator, transcriptional activator of nhaA id=12550842 bin=BDI species=Thauera terpenica genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
LysR family transcriptional regulator; K03717 LysR family transcriptional regulator, transcriptional activator of nhaA
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
scnpilot_p_inoc_scaffold_885_curated_10
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10475..11152
DNA (678bp) protein (226aa)
HflBKC-binding inner membrane protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003473262
hypothetical protein; K06890
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_885_curated_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11178..11627
DNA (450bp) protein (150aa)
hypothetical protein id=12550839 bin=BDI species=Delftia acidovorans genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_885_curated_12
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11775..12251
DNA (477bp) protein (159aa)
Universal stress protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4L8_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_885_curated_13
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12251..12766
DNA (516bp) protein (172aa)
phosphatidylglycerophosphatase A id=12551269 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
phosphatidylglycerophosphatase A
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_885_curated_14
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12763..13305
DNA (543bp) protein (181aa)
CinA domain protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W2Y2_ACISJ
CinA domain-containing protein; K03743
CinA domain protein {ECO:0000313|EMBL:ABM40607.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_p_inoc_scaffold_885_curated_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13288..14397)
DNA (1110bp) protein (370aa)
s-adenosylmethionine/tRNA-ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-]
S-adenosylmethionine tRNA ribosyltransferase n=1 Tax=Acidovorax radicis RepID=UPI0002375224
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_885_curated_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14498..15778)
DNA (1281bp) protein (427aa)
Metal dependent phosphohydrolase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6B8_9BURK
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AFU48095.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_885_curated_17
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15876..17969
DNA (2094bp) protein (698aa)
ATP-dependent DNA helicase RecG n=1 Tax=Acidovorax radicis RepID=UPI0002375221
ATP-dependent DNA helicase RecG
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_885_curated_18
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17959..20739)
DNA (2781bp) protein (927aa)
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Thauera sp. 63 RepID=N6Y670_9RHOO
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_885_curated_19
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20832..21797
DNA (966bp) protein (322aa)
LysR family transcriptional regulator id=12550883 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
LysR family transcriptional regulator; K04761 LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_885_curated_20
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21843..22343
DNA (501bp) protein (167aa)
DNA-binding protein n=1 Tax=Acidovorax radicis RepID=UPI000237521E
ferritin dps family protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_885_curated_21
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22410..23273
DNA (864bp) protein (288aa)
4-hydroxybenzoate octaprenyltransferase {ECO:0000256|SAAS:SAAS00210629}; EC=2.5.1.- {ECO:0000256|SAAS:SAAS00272707};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
4-hydroxybenzoate polyprenyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036A1F20
4-hydroxybenzoate octaprenyltransferase-like
scnpilot_p_inoc_scaffold_885_curated_22
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23280..24113)
DNA (834bp) protein (278aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2]
pyrroline-5-carboxylate reductase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035FF5BA
scnpilot_p_inoc_scaffold_885_curated_23
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24252..25751)
DNA (1500bp) protein (500aa)
glycerol kinase; K00864 glycerol kinase [EC:2.7.1.30]
Glycerol kinase {ECO:0000255|HAMAP-Rule:MF_00186}; EC=2.7.1.30 {ECO:0000255|HAMAP-Rule:MF_00186};; ATP:glycerol 3-phosphotransferase {ECO:0000255|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000255|HAMAP-Rule:MF_00186}; Short=GK {ECO:0000255|HAMAP-Rule:MF_00186};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Glycerol kinase n=1 Tax=Acidovorax sp. (strain JS42) RepID=GLPK_ACISJ rbh
scnpilot_p_inoc_scaffold_885_curated_24
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25773..26540)
DNA (768bp) protein (256aa)
DeoR family transcriptional regulator id=12550889 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
DeoR family transcriptional regulator; K02444 DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_885_curated_25
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26729..27808
DNA (1080bp) protein (360aa)
ABC transporter-like protein id=12550890 bin=BDI species=Acidovorax sp. MR-S7 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ABC transporter-like protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_885_curated_26
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27810..28886
DNA (1077bp) protein (359aa)
ABC transporter-like protein id=12550891 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ABC transporter-like protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_885_curated_27
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28883..29779
DNA (897bp) protein (299aa)
ABC transporter permease n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000368AAEF
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:GAD21907.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein
scnpilot_p_inoc_scaffold_885_curated_28
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29772..30584
DNA (813bp) protein (271aa)
sugar ABC transporter permease n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003684342
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:GAD21908.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein
scnpilot_p_inoc_scaffold_885_curated_29
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30586..30894
DNA (309bp) protein (103aa)
Putative integral membrane protein n=2 Tax=Acidovorax RepID=A1W315_ACISJ
putative integral membrane protein
Putative integral membrane protein {ECO:0000313|EMBL:ACM31864.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_p_inoc_scaffold_885_curated_30
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31074..32807
DNA (1734bp) protein (578aa)
Extracellular solute-binding protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MBU5_ACIET
Extracellular solute-binding protein {ECO:0000313|EMBL:ACM31865.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
Displaying items 1-30 of 49 in total

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